RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PRDX4Q13162 271 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 DCTN2Q13561 401 aaKnown RBP13.4□□□□□ -0.26
CHMP3-203ENST00000409225 SSX2Q16385 188 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 KHDC1LQ5JSQ8 128 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 METTL21CQ5VZV1 264 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 FAM57BQ71RH2 274 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 C11orf42Q8N5U0 333 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 CSNK2A3Q8NEV1 391 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 MYDGFQ969H8 173 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 CHID1Q9BWS9 393 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 FGF23Q9GZV9 251 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-203ENST00000409225 YY1AP1Q9H869 796 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 ZNF222Q9UK12 451 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 A0A1W2PPH5 198 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 F2RL2O00254 374 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 RHBDL1O75783 438 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 ARG1P05089 322 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 CHRM2P08172 466 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 CCDC159P0C7I6 412 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 NHLRC4P0CG21 123 aaPredicted RBP13.39□□□□□ -0.27
CHMP3-203ENST00000409225 RHCEP18577 417 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 HSD11B1P28845 292 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 SLC25A1P53007 311 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 LIPEQ05469 1076 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 KLF10Q13118 480 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 TMEM200BQ69YZ2 307 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 CENPVQ7Z7K6 275 aaPredicted RBP13.39□□□□□ -0.27
CHMP3-203ENST00000409225 OR4M1Q8NGD0 313 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 OR5P3Q8WZ94 311 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 FAM162AQ96A26 154 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 FOXRED1Q96CU9 486 aaPredicted RBP13.39□□□□□ -0.27
CHMP3-203ENST00000409225 RNF170Q96K19 258 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 GPR61Q9BZJ8 451 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 SP140LQ9H930 580 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 DNAJC27Q9NZQ0 273 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 NDUFAF4Q9P032 175 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 MPC1Q9Y5U8 109 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 DNAH7Q8WXX0 4024 aa13.39□□□□□ -0.27
CHMP3-203ENST00000409225 hCG_1809904A0A1W2PP81 198 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 A0A1W2PPE2 198 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 A0A1W2PR64 198 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 A0A1W2PRV1 198 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 IDH3BO43837 385 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 JUNBP17275 347 aaPredicted RBP13.38□□□□□ -0.27
CHMP3-203ENST00000409225 CFL1P23528 166 aaKnown RBP13.38□□□□□ -0.27
CHMP3-203ENST00000409225 ENTPD1P49961 510 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 GRB2P62993 217 aaKnown RBP13.38□□□□□ -0.27
CHMP3-203ENST00000409225 MAPRE2Q15555 327 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 FTMTQ8N4E7 242 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 LINC00482Q8N8I6 264 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 ZNF511Q8NB15 262 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 OR2T4Q8NH00 348 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 PIGCQ92535 297 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 FUZQ9BT04 418 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 BRD7Q9NPI1 651 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 USE1Q9NZ43 259 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 ZNF319Q9P2F9 582 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 LRP12Q9Y561 859 aa13.38□□□□□ -0.27
CHMP3-203ENST00000409225 TENM2Q9NT68 2774 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 DHRS12A0PJE2 317 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 ZNF593O00488 134 aaPredicted RBP13.37□□□□□ -0.27
CHMP3-203ENST00000409225 NCK1P16333 377 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 DCTDP32321 178 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 SLC15A1P46059 708 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 GPM6AP51674 278 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 ZNF121P58317 390 aaPredicted RBP13.37□□□□□ -0.27
CHMP3-203ENST00000409225 ZNF273Q14593 569 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 SNCBQ16143 134 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 LDLRAD2Q5SZI1 272 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 THAP5Q7Z6K1 395 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 SLC15A3Q8IY34 581 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 TIGD4Q8IY51 512 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 HPSE2Q8WWQ2 592 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 MALSU1Q96EH3 234 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 SDSLQ96GA7 329 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 OR10A2Q9H208 303 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 AP3M1Q9Y2T2 418 aa13.37□□□□□ -0.27
CHMP3-203ENST00000409225 TBL2Q9Y4P3 447 aaKnown RBP13.37□□□□□ -0.27
CHMP3-203ENST00000409225 ACKR3P25106 362 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 LMO1P25800 156 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 FMO3P31513 532 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 EIF2B1Q14232 305 aaKnown RBP13.36□□□□□ -0.27
CHMP3-203ENST00000409225 KRT72Q14CN4 511 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 KLHL22Q53GT1 634 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 FAM76BQ5HYJ3 339 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 C10orf99Q6UWK7 81 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 PRSS45Q7RTY3 260 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 LINC00471Q8N535 108 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 OR4X2Q8NGF9 303 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 OR52H1Q8NGJ2 320 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 OR2T27Q8NH04 317 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 RCN3Q96D15 328 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 PGAM5Q96HS1 289 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 DHRS1Q96LJ7 313 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 SIKE1Q9BRV8 207 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 ABCB9Q9NP78 766 aa13.36□□□□□ -0.27
CHMP3-203ENST00000409225 INTS9Q9NV88 658 aaKnown RBP13.36□□□□□ -0.27
CHMP3-203ENST00000409225 ODF3BA8MYP8 253 aa13.35□□□□□ -0.27
CHMP3-203ENST00000409225 EDF1O60869 148 aaKnown RBP13.35□□□□□ -0.27
CHMP3-203ENST00000409225 GYPBP06028 91 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms