RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 NXNL2Q5VZ03 156 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 LYPD2Q6UXB3 125 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 FAM220AQ7Z4H9 259 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 LDLRAD3Q86YD5 345 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 IQCF1Q8N6M8 205 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 C8orf46Q8TAG6 207 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 H1FXQ92522 213 aaKnown RBP10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 LHX4Q969G2 390 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 TEAD3Q99594 435 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 TVP23BQ9NYZ1 205 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 NLKQ9UBE8 527 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 SLC25A10Q9UBX3 287 aaPredicted RBP10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 NUFIP1Q9UHK0 495 aaKnown RBP10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 SLC7A11Q9UPY5 501 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 POMPQ9Y244 141 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 SF3B6Q9Y3B4 125 aaKnown RBP10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 RHBDD3Q9Y3P4 386 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 PCDHGB1Q9Y5G3 927 aa10.66□□□□□ -0.7
SNORD88B-201ENST00000408454 TCRBV3S1A0A5B6 114 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 ZNF850A8MQ14 1090 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 C22orf46C9J442 243 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 DLGAP1O14490 977 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 GATBO75879 557 aaKnown RBP10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 ARF6P62330 175 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 DEFB112Q30KQ8 113 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 BCL2L15Q5TBC7 163 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 PLCXD3Q63HM9 321 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 STUMQ69YW2 141 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 LYPD4Q6UWN0 246 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 BRD3OSQ6XYD6 125 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 PRSS45Q7RTY3 260 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 C10orf35Q96D05 121 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 RAB3IPQ96QF0 476 aaPredicted RBP10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 HEXA-AS1Q9H8Q6 139 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 MED20Q9H944 212 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 VNN3Q9NY84 501 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 WARS2Q9UGM6 360 aaKnown RBP10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 SNX5Q9Y5X3 404 aa10.65□□□□□ -0.7
SNORD88B-201ENST00000408454 WNK2Q9Y3S1 2297 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 CENPVL3A0A0U1RRI6 287 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 OR2AT4A6NND4 320 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 SIGLEC5O15389 551 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 SELENOFO60613 162 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 T-ENOLP0DO92 83 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 NDUFB7P17568 137 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 TGFBR2P37173 567 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 CAPZA1P52907 286 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 OCLNQ16625 522 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 CLVS2Q5SYC1 327 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 LIAT1Q6ZQX7 453 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 ZNF826PQ6ZT77 177 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 MEPCEQ7L2J0 689 aaKnown RBP10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 KRT74Q7RTS7 529 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 BCL6BQ8N143 479 aaPredicted RBP10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 ZNF561Q8N587 486 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 OR8B12Q8NGG6 310 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 OR8B4Q96RC9 309 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 CCL13Q99616 98 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 DCTN5Q9BTE1 182 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 PBOV1Q9GZY1 135 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 SIRPDQ9H106 197 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 CLN6Q9NWW5 311 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 CTSZQ9UBR2 303 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 GLS2Q9UI32 602 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 GTF2A1LQ9UNN4 478 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 PCDHGB5Q9Y5G0 923 aa10.64□□□□□ -0.71
SNORD88B-201ENST00000408454 IGHV3OR16-10A0A075B7F0 116 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 CLPSL1A2RUU4 121 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 FAM181BA6NEQ2 426 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 H0YAE9 185 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 NRASP01111 189 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 MELTFP08582 738 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 ACAA1P09110 424 aaPredicted RBP10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 OCM2P0CE71 109 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 OCMP0CE72 109 aaPredicted RBP10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 MMP9P14780 707 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 GABRA2P47869 451 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 UBE2E1P51965 193 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 LGALS4P56470 323 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 CDC42P60953 191 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 ACTC1P68032 377 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 ACTA1P68133 377 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 IKZF1Q13422 519 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 PTGES3Q15185 160 aaKnown RBP10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 MIDNQ504T8 468 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 C1orf146Q5VVC0 180 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 OLFML2AQ68BL7 652 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 DHRS7BQ6IAN0 325 aaPredicted RBP10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 FAHD1Q6P587 224 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 BRICD5Q6PL45 260 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 ZNF322Q6U7Q0 402 aaPredicted RBP10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 ZNF788Q6ZQV5 615 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 PLEKHG7Q6ZR37 379 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 VMO1Q7Z5L0 202 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 CALHM1Q8IU99 346 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 Q8IYB0 196 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 ZSCAN4Q8NAM6 433 aaPredicted RBP10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 LY6G5BQ8NDX9 201 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 C19orf18Q8NEA5 215 aa10.63□□□□□ -0.71
SNORD88B-201ENST00000408454 TMEM163Q8TC26 289 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms