RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 LOC102723971A0A1B0GUV8 181 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 HYAL3O43820 417 aaPredicted RBP8.95□□□□□ -0.98
PTPRM-203ENST00000400060 UEVLDQ8IX04 471 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 OR10P1Q8NGE3 313 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 RNASEH2CQ8TDP1 164 aaKnown RBP8.95□□□□□ -0.98
PTPRM-203ENST00000400060 ORAOV1Q8WV07 137 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 BORCS8Q96FH0 119 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 NEIL1Q96FI4 390 aaPredicted RBP8.95□□□□□ -0.98
PTPRM-203ENST00000400060 GPR84Q9NQS5 396 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 PAM16Q9Y3D7 125 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 COL16A1Q07092 1604 aaPredicted RBP8.95□□□□□ -0.98
PTPRM-203ENST00000400060 ARR3P36575 388 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 PIGPP57054 158 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 ERVS71-1P61550 626 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 RPS18P62269 152 aaKnown RBP8.95□□□□□ -0.98
PTPRM-203ENST00000400060 C1orf194Q5T5A4 169 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 FA2HQ7L5A8 372 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 OR4S1Q8NGB4 309 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 ZCCHC14Q8WYQ9 949 aaKnown RBP8.95□□□□□ -0.98
PTPRM-203ENST00000400060 SDF2Q99470 211 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 WNT5BQ9H1J7 359 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 IL19Q9UHD0 177 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 SERINC4A6NH21 518 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 SSSCA1O60232 199 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 ZNF737O75373 536 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 MT-ND6P03923 174 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 STAG3L2P0CL84 134 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 HIST1H1DP16402 221 aaKnown RBP8.95□□□□□ -0.98
PTPRM-203ENST00000400060 RTN4IP1Q8WWV3 396 aaPredicted RBP8.95□□□□□ -0.98
PTPRM-203ENST00000400060 SLC35A4Q96G79 324 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 THOC3Q96J01 351 aaKnown RBP8.95□□□□□ -0.98
PTPRM-203ENST00000400060 GINS3Q9BRX5 216 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 EGLN1Q9GZT9 426 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 S1PR5Q9H228 398 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 CALHM2Q9HA72 323 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 LRIT1Q9P2V4 623 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 C19orf53Q9UNZ5 99 aaPredicted RBP8.95□□□□□ -0.98
PTPRM-203ENST00000400060 SRPK3Q9UPE1 567 aa8.95□□□□□ -0.98
PTPRM-203ENST00000400060 DHRS7CA6NNS2 312 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 LINC01387J3KSC0 135 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 P2RY10O00398 339 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 TNFRSF10CO14798 259 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 IGLV3-27P01718 113 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 BCL2P10415 239 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 LCN2P80188 198 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 MESP1Q9BRJ9 268 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 SERTAD3Q9UJW9 196 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 WNT6Q9Y6F9 365 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 A8MWP6 167 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 SIRPB1O00241 398 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 OR7C2O60412 319 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HSBP1O75506 76 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 BCL6P41182 706 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 ARF6P62330 175 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 GRB2P62993 217 aaKnown RBP8.94□□□□□ -0.98
PTPRM-203ENST00000400060 PRDX1Q06830 199 aaKnown RBP8.94□□□□□ -0.98
PTPRM-203ENST00000400060 RPEL1Q2QD12 228 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HLA-DRB5Q30154 266 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 C16orf82Q7Z2V1 217 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HOGA1Q86XE5 327 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 ARRDC3Q96B67 414 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 PMCHL2Q9BQD1 86 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 TMEM208Q9BTX3 173 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 TMEM191AQ9H0A3 160 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 CNTD2Q9H8S5 307 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 GOLGA4Q13439 2230 aaKnown RBP8.94□□□□□ -0.98
PTPRM-203ENST00000400060 TRBV5-5A0A0J9YX44 114 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 A0A1W2PN81 502 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HIST1H2BKO60814 126 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 LEFTY1O75610 366 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 GPR75O95800 540 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HPRT1P00492 218 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HIST1H2BJP06899 126 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 RAC2P15153 192 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HNRNPA2B1P22626 353 aaKnown RBP8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HIST1H2BOP23527 126 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HIST1H2BBP33778 126 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 CHRNA7P36544 502 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 ACAA2P42765 397 aaKnown RBP8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HIST1H2BDP58876 126 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HIST1H2BCP62807 126 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 SMAD4Q13485 552 aaKnown RBP8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HIST2H2BEQ16778 126 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.94□□□□□ -0.98
PTPRM-203ENST00000400060 ZNF343Q6P1L6 599 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HIST1H2BHQ93079 126 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 WNT2BQ93097 391 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 NUDT11Q96G61 164 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 MS4A4AQ96JQ5 239 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 FAM71F1Q96KD3 344 aaPredicted RBP8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HIST1H2BNQ99877 126 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 HIST1H2BMQ99879 126 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 TRBV9A0A0B4J1U6 114 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 SLC31A1O15431 190 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 RAB35Q15286 201 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 PDLIM3Q53GG5 364 aaPredicted RBP8.94□□□□□ -0.98
PTPRM-203ENST00000400060 TMEM255AQ5JRV8 349 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 CLLU1OSQ5K130 101 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 OR10G4Q8NGN3 311 aa8.94□□□□□ -0.98
PTPRM-203ENST00000400060 OTOSQ8NHW6 89 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms