RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 LHFPL6Q9Y693 200 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 ACTL6AO96019 429 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 RAC2P15153 192 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 OPCMLQ14982 345 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 ZBTB44Q8NCP5 570 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 SLX1AQ9BQ83 275 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 C9orf172C9J069 976 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 SLC33A1O00400 549 aaPredicted RBP12.36□□□□□ -0.43
SCAF4-202ENST00000399804 RGS13O14921 159 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 GALR2O43603 387 aaPredicted RBP12.36□□□□□ -0.43
SCAF4-202ENST00000399804 ADRB1P08588 477 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 OR4E1P0C645 316 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 EPHA1P21709 976 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 CAV2P51636 162 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 GPM6AP51674 278 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 PMP22Q01453 160 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 CAMK2BQ13554 666 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 POU4F3Q15319 338 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 ZNF528Q3MIS6 628 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 PAN3Q58A45 887 aaKnown RBP12.36□□□□□ -0.43
SCAF4-202ENST00000399804 FAM27BQ5VT28 67 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 OR2T2Q6IF00 324 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 C20orf196Q8IYI0 205 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 OSR2Q8N2R0 312 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 LRRC46Q96FV0 321 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 TAS2R3Q9NYW6 316 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 PRELID1Q9Y255 219 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 NDUFB6O95139 128 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 CST2P09228 141 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 RAB2AP61019 212 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 SSBP1Q04837 148 aaKnown RBP12.35□□□□□ -0.43
SCAF4-202ENST00000399804 MZT1Q08AG7 82 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 OR8G1Q15617 311 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 UNQ9370/PRO34162Q6UXP9 181 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 GVQW1Q8N7I0 195 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 TMEM229BQ8NBD8 167 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 CHAC2Q8WUX2 184 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 PRRX2Q99811 253 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 ZNF2Q9BSG1 426 aaPredicted RBP12.35□□□□□ -0.43
SCAF4-202ENST00000399804 RTL8AQ9BWD3 113 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 CUL9Q8IWT3 2517 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 BORCS7-ASMTA0A0B4J1R7 106 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 DEGS1O15121 323 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 LMX1BO60663 402 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 PLAURQ03405 335 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 SMUG1Q53HV7 270 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 TEX30Q5JUR7 227 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 ZNF573Q86YE8 665 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 PDZD9Q8IXQ8 264 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 SLC7A10Q9NS82 523 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 NECAP2Q9NVZ3 263 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 ZIC3O60481 467 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 SCO1O75880 301 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 HIST1H1DP16402 221 aaKnown RBP12.35□□□□□ -0.43
SCAF4-202ENST00000399804 ADRA2CP18825 462 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 DEFA5Q01523 94 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 OR1J1Q8NGS3 322 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 SRXN1Q9BYN0 137 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 TREM1Q9NP99 234 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 ZNF391Q9UJN7 358 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 POLEQ07864 2286 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 ANKRD20A5PA0PJZ0 165 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 CD59P13987 128 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 TNFSF4P23510 183 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 ST3GAL2Q16842 350 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 LTC4SQ16873 150 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 FAM209AQ5JX71 171 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 SLC22A25Q6T423 547 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 OR2AK2Q8NG84 335 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 OCSTAMPQ9BR26 566 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 OR2H1Q9GZK4 316 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 MPDZO75970 2070 aa12.35□□□□□ -0.43
SCAF4-202ENST00000399804 TECTAO75443 2155 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 A0A0G2JMM0 328 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 A0A1W2PPB8 328 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 A0A1W2PRS3 328 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 TTLL8A6PVC2 850 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 KIR3DP1A8MWS1 328 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 OR5H8P0DN80 308 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 SPINK2P20155 84 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 ELP2Q6IA86 826 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 BRICD5Q6PL45 260 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 OR2W3Q7Z3T1 314 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 DOCK7Q96N67 2140 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 SPACA1Q9HBV2 294 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 B3GAT1Q9P2W7 334 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 ZNF230Q9UIE0 474 aaPredicted RBP12.34□□□□□ -0.43
SCAF4-202ENST00000399804 SERPINE3A8MV23 424 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 CTDSPLO15194 276 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 CRYAAP02489 173 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 RAB6AP20340 208 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 CSRP2Q16527 193 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 ZNF239Q16600 458 aaKnown RBP12.34□□□□□ -0.43
SCAF4-202ENST00000399804 OR2A2Q6IF42 318 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 ALKAL2Q6UX46 152 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 NAA40Q86UY6 237 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 SIGLEC12Q96PQ1 595 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 SPIN2AQ99865 258 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 SPIN2BQ9BPZ2 258 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 MKI67P46013 3256 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms