RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 OR51G2Q8NGK0 314 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 RPL3LQ92901 407 aaKnown RBP12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 GCDHQ92947 438 aaPredicted RBP12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 RFKQ969G6 155 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 FAM71F1Q96KD3 344 aaPredicted RBP12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 RAB3IPQ96QF0 476 aaPredicted RBP12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 APOL4Q9BPW4 351 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 RIBC2Q9H4K1 309 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 MRM2Q9UI43 246 aaKnown RBP12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 R4GMQ9 66 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 DNAJC9-AS1A6NH13 148 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 DHRS7CA6NNS2 312 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 H3BNX3 289 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 CLDN34H7C241 214 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 ALPLP05186 524 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 OR2T7P0C7T2 308 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 TGM4P49221 684 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 GPM6AP51674 278 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 CDC42P60953 191 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 BCL2L15Q5TBC7 163 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 GPR157Q5UAW9 335 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 BTN2A1Q7KYR7 527 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 OR2T27Q8NH04 317 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 TRUB1Q8WWH5 349 aaKnown RBP12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 ST8SIA4Q92187 359 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 C1orf147Q96MC9 270 aaPredicted RBP12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 WDFY2Q96P53 400 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 CCL13Q99616 98 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 RASSF4Q9H2L5 321 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 OR51I2Q9H344 312 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 PRDM13Q9H4Q3 707 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 USE1Q9NZ43 259 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 ENPP5Q9UJA9 477 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 RPUSD1Q9UJJ7 312 aaKnown RBP12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 OR52A1Q9UKL2 312 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 PIGLQ9Y2B2 252 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 SNX5Q9Y5X3 404 aa12.31□□□□□ -0.44
SMIM11A-203ENST00000399299 IGHV3OR16-10A0A075B7F0 116 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 ZNF732B4DXR9 585 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 HAX1O00165 279 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 TOX4O94842 621 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 KRT8P05787 483 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 FAHP16930 419 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 AMY2BP19961 511 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 BAMBIQ13145 260 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 KPNB1Q14974 876 aaKnown RBP12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 CEP78Q5JTW2 689 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 METTL11BQ5VVY1 283 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 TMEM42Q69YG0 159 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 ZNF788Q6ZQV5 615 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 SSX6Q7RTT6 188 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 C10orf67Q8IYJ2 551 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 LY6G5BQ8NDX9 201 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 PPP1R14AQ96A00 147 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 EME1Q96AY2 570 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 SEH1LQ96EE3 360 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 HRASLS5Q96KN8 279 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 TBX15Q96SF7 602 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 PCGF1Q9BSM1 259 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 SIRPDQ9H106 197 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 WDR13Q9H1Z4 485 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 DNAJB11Q9UBS4 358 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 GTF2A1LQ9UNN4 478 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 ORC6Q9Y5N6 252 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 V9GYS6 101 aa12.3□□□□□ -0.44
SMIM11A-203ENST00000399299 A0A1B0GTI1 187 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 A0A1B0GW55 424 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 NKX6-3A6NJ46 265 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 DLGAP1O14490 977 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 EI24O14681 340 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 MAGEB4O15481 346 aaPredicted RBP12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 AKR7A2O43488 359 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 NDUFB3O43676 98 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 SULT1C4O75897 302 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 NRASP01111 189 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 SFTPBP07988 381 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 RNASE1P07998 156 aaKnown RBP12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 DUX4L2P0CJ85 424 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 DUX4L3P0CJ86 424 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 DUX4L4P0CJ87 422 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 DUX4L5P0CJ88 424 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 DUX4L6P0CJ89 424 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 DUX4L7P0CJ90 424 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 CCL1P22362 96 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 ELF3P78545 371 aaPredicted RBP12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 PDCD1Q15116 288 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 LRRC10Q5BKY1 277 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 ZNF684Q5T5D7 378 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 PLCXD3Q63HM9 321 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 DUX4L9Q6RFH8 374 aaPredicted RBP12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 BRD3OSQ6XYD6 125 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 PLEKHG7Q6ZR37 379 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 MOB3CQ70IA8 216 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 FAM216BQ8N7L0 139 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 ANGPTL6Q8NI99 470 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 C8orf46Q8TAG6 207 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 ZNF671Q8TAW3 534 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 AQP3Q92482 292 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 MED30Q96HR3 178 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 CNTD2Q9H8S5 307 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms