RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ZNF732B4DXR9 585 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 J3QLW9 94 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 TNFRSF13BO14836 293 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 AKR7A2O43488 359 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 NRASP01111 189 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ZNF19P17023 458 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 CCL1P22362 96 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 KIR3DL2P43630 455 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 PITPNBP48739 271 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 NANOS3P60323 173 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OGFRL1Q5TC84 451 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ZNF691Q5VV52 312 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 PLCXD3Q63HM9 321 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ZNF841Q6ZN19 808 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DOK3Q7L591 496 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 NLRC3Q7RTR2 1065 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 PACRGLQ8N7B6 248 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OR8B3Q8NGG8 313 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OR8B2Q96RD0 313 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 WDR13Q9H1Z4 485 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 RASSF4Q9H2L5 321 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ABCB9Q9NP78 766 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 GPR173Q9NS66 373 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OPN4Q9UHM6 478 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 PCDHGB1Q9Y5G3 927 aa11.75□□□□□ -0.53
HLA-DQB1-202ENST00000399079 PPIAL4CA0A0B4J2A2 164 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 TMEM210A6NLX4 147 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 CASQ2O14958 399 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ADAM20O43506 726 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 SYT7O43581 403 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 RHBDL1O75783 438 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 GATA3P23771 443 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 CFHR2P36980 270 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 GNG3P63215 75 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ADARB1P78563 741 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 SRSF2Q01130 221 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 PAX2Q02962 417 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ZBTB37Q5TC79 503 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 TEX36Q5VZQ5 186 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 TMEM42Q69YG0 159 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 Q6ZSR3 168 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 KCTD20Q7Z5Y7 419 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DHRSXQ8N5I4 330 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OR5T2Q8NGG2 359 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OR5A2Q8NGI9 324 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OR52I1Q8NGK6 324 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OR2G2Q8NGZ5 317 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 C4orf36Q96KX1 117 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 MDFIQ99750 246 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ZNF649Q9BS31 505 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ALG8Q9BVK2 526 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OR51I2Q9H344 312 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DCLRE1BQ9H816 532 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ISG20L2Q9H9L3 353 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 FRRS1LQ9P0K9 344 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 CLN8Q9UBY8 286 aa11.74□□□□□ -0.53
HLA-DQB1-202ENST00000399079 A0A1B0GVI7 797 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 A0A1B0GW55 424 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 SRRM5B3KS81 715 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 J3QLI3 93 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 FCN3O75636 299 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 FADS2O95864 444 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 IGHA1P01876 353 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 GNAO1P09471 354 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DUX4L2P0CJ85 424 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DUX4L3P0CJ86 424 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DUX4L4P0CJ87 422 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DUX4L5P0CJ88 424 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DUX4L6P0CJ89 424 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DUX4L7P0CJ90 424 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 RAB40BQ12829 278 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 GALEQ14376 348 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 KCNJ8Q15842 424 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 MICBQ29980 383 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 CLVS2Q5SYC1 327 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 TTC23Q5W5X9 447 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 WDR25Q64LD2 544 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DUX4L9Q6RFH8 374 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ITFG2Q969R8 447 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 PELI1Q96FA3 418 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 SMURF1Q9HCE7 757 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 C8orf4Q9NR00 106 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 SNTG1Q9NSN8 517 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ERVK13-1Q9NX77 482 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DUX4Q9UBX2 424 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OR5V1Q9UGF6 321 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 RPL36Q9Y3U8 105 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 INSIG2Q9Y5U4 225 aa11.73□□□□□ -0.53
HLA-DQB1-202ENST00000399079 LOC107986453A0A1B0GWG9 222 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DHRS7CA6NNS2 312 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 TMPRSS2O15393 492 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 TFF1P04155 84 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ZNF12P17014 697 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ACTA2P62736 377 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ACTG2P63267 376 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 HAGHLQ6PII5 290 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 FGFRL1Q8N441 504 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DACT3Q96B18 629 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 TECTBQ96PL2 329 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms