RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 OR5H15A6NDH6 313 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 PATE3B3GLJ2 98 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 ENSAO43768 121 aaKnown RBP12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 PTAFRP25105 342 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 NKX6-1P78426 367 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 EXOSC2Q13868 293 aaKnown RBP12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 FAM122BQ7Z309 247 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 CDH26Q8IXH8 852 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 OR6S1Q8NH40 331 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 SLC25A32Q9H2D1 315 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 OTOFQ9HC10 1997 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 LIMS1P48059 325 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 PRAMEF5Q5TYX0 476 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 PRAMEF6Q5VXH4 476 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 SLC35G3Q8N808 338 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 MIXL1Q9H2W2 232 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 LIN7CQ9NUP9 197 aaKnown RBP12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 V9GYH0 126 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 A0A0U1RQK1 487 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 A0A1W2PPH5 198 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZNF891A8MT65 544 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 NUDT19A8MXV4 375 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 M0R1B8 84 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 NXPH3O95157 252 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 M6PRP20645 277 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 GPM6AP51674 278 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 DHODHQ02127 395 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 OR8G2PQ6IF36 304 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 FRZBQ92765 325 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 CNTD2Q9H8S5 307 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 PLSCR3Q9NRY6 295 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 ATP23Q9Y6H3 246 aa12.65□□□□□ -0.38
PCDHGA11-201ENST00000398587 C21orf140B9A014 251 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 TPPPO94811 219 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 SLC6A1P30531 599 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 RPL35P42766 123 aaKnown RBP12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 USF2Q15853 346 aaPredicted RBP12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 SMIM21Q3B7S5 101 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 SPATA46Q5T0L3 261 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 TMEM91Q6ZNR0 172 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 Q8IYB0 196 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 C1orf87Q8N0U7 546 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 DEFB108BQ8NET1 73 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 NANPQ8TBE9 248 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 FBLIM1Q8WUP2 373 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 SUCNR1Q9BXA5 334 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 DLL4Q9NR61 685 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 PPP1R3CQ9UQK1 317 aa12.65□□□□□ -0.39
PCDHGA11-201ENST00000398587 CTDSPLO15194 276 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 KLK10O43240 276 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 FPR2P25090 351 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 OR5M9Q8NGP3 310 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 CMBLQ96DG6 245 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 GNPNAT1Q96EK6 184 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 C4orf51C9J302 202 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 LGALS8O00214 317 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 HLA-HP01893 362 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 APOA2P02652 100 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 OR2M3Q8NG83 312 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 SSX3Q99909 188 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 DSPPQ9NZW4 1301 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 CD96P40200 585 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 ST3GAL2Q16842 350 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 ZNF468Q5VIY5 522 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 RGS7BPQ6MZT1 257 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 C17orf107Q6ZR85 190 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 WFDC8Q8IUA0 241 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 ZNF808Q8N4W9 903 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 CISD2Q8N5K1 135 aaKnown RBP12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 MED30Q96HR3 178 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 UHRF2Q96PU4 802 aa12.64□□□□□ -0.39
PCDHGA11-201ENST00000398587 ANKRD20A5PA0PJZ0 165 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 CCL3P10147 92 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 AVPR2P30518 371 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 GPR12P47775 334 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 AGFG1P52594 562 aaKnown RBP12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 CATSPERDQ86XM0 798 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 ADPRHL1Q8NDY3 354 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 OR8B12Q8NGG6 310 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 EDARADDQ8WWZ3 215 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 NIPSNAP3BQ9BS92 247 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 TDRD6O60522 2096 aaKnown RBP12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 DNPH1O43598 174 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 GSTZ1O43708 216 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 SCCPDHQ8NBX0 429 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 SFT2D1Q8WV19 159 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 ASXL3Q9C0F0 2248 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 RPS10-NUDT3A0A1W2PQS6 291 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 TUBAL3A6NHL2 446 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 RFPL4AA6NLU0 287 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 RFPL4AL1F8VTS6 287 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 RPS10P46783 165 aaKnown RBP12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 STARD6P59095 220 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 VASH2Q86V25 355 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 NTMQ9P121 344 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 BTBD17A6NE02 478 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 H2AFB1P0C5Y9 115 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 MMP16P51512 607 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 SPINK14Q6IE38 97 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 NAA40Q86UY6 237 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms