RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 OR8B3Q8NGG8 313 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 OR52N4Q8NGI2 321 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 OR8B2Q96RD0 313 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 FAM103A1Q9BTL3 118 aaKnown RBP10.14□□□□□ -0.79
TTC28-201ENST00000397906 TMEM208Q9BTX3 173 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 MBD1Q9UIS9 605 aaPredicted RBP10.14□□□□□ -0.79
TTC28-201ENST00000397906 IFITM5A6NNB3 132 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 ADAM20O43506 726 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 MPZL1O95297 269 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 TMEM267Q0VDI3 215 aaPredicted RBP10.14□□□□□ -0.79
TTC28-201ENST00000397906 CDK5R1Q15078 307 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 JMJD6Q6NYC1 403 aaPredicted RBP10.14□□□□□ -0.79
TTC28-201ENST00000397906 OTOSQ8NHW6 89 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 PTPMT1Q8WUK0 201 aaPredicted RBP10.14□□□□□ -0.79
TTC28-201ENST00000397906 SLC25A35Q3KQZ1 300 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 M1APQ8TC57 530 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 SLC35B4Q969S0 331 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 FAM122AQ96E09 287 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 RSRP1Q9BUV0 290 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 GABRA1P14867 456 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 RAB5CP51148 216 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 MRGPRDQ8TDS7 321 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 RASL10BQ96S79 203 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 A0A1B0GTQ1 180 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 GPX5O75715 221 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 NTN1O95631 604 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 LY86O95711 162 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 RELAQ04206 551 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 PIK3IP1Q96FE7 263 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 UGT2A1Q9Y4X1 527 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 SHANK3Q9BYB0 1731 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 A0A0B4J2E0 115 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 A0A1B0GX12 115 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 SRD5A2P31213 254 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 LIMK1P53667 647 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 ISL1P61371 349 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 TOR2AQ5JU69 321 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 ACSM6Q6P461 480 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 GABARAPL3Q9BY60 117 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 SPINT1O43278 529 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 S100A11P31949 105 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 RAB1CQ92928 201 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 IGKV3-7A0A075B6H7 116 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 Q3ZCU0 254 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 HIKESHIQ53FT3 197 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 GPX8Q8TED1 209 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 OR2D2Q9H210 308 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 FCGR3BO75015 233 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 MAMSTRQ6ZN01 415 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 FAM58AQ8N1B3 248 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 RPUSD4Q96CM3 377 aaKnown RBP10.13□□□□□ -0.79
TTC28-201ENST00000397906 TSPAN32Q96QS1 320 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 ZNF320A2RRD8 509 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 CLEC18AA5D8T8 446 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 TMEM200CA6NKL6 621 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 EPHA2P29317 976 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 CBLN3Q6UW01 205 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 KIAA1958Q8N8K9 716 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 CLEC18CQ8NCF0 446 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 SBK3P0C264 359 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 S100A4P26447 101 aaKnown RBP10.13□□□□□ -0.79
TTC28-201ENST00000397906 THBS4P35443 961 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 SAP30LQ9HAJ7 183 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 PRRX1P54821 245 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 ZG16BQ96DA0 208 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 COA4Q9NYJ1 87 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 MAGEB1P43366 347 aa10.13□□□□□ -0.79
TTC28-201ENST00000397906 DUSP15Q9H1R2 295 aaPredicted RBP10.13□□□□□ -0.79
TTC28-201ENST00000397906 A0A1B0GTH9 108 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 PDGFBP01127 241 aaPredicted RBP10.12□□□□□ -0.79
TTC28-201ENST00000397906 THSD4Q6ZMP0 1018 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 ZNF788Q6ZQV5 615 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 OR52B4Q8NGK2 314 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 SIAEQ9HAT2 523 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 UBR3Q6ZT12 1888 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 A0A0A6YYJ9 748 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 FUT7Q11130 342 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 DPF1Q92782 380 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 RHNO1Q9BSD3 238 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 C21orf140B9A014 251 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 C5orf67F2Z3F1 127 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 RRASP10301 218 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 EID2BQ96D98 161 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 RCL1Q9Y2P8 373 aaKnown RBP10.12□□□□□ -0.79
TTC28-201ENST00000397906 DBX1A6NMT0 343 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 TIGD3Q6B0B8 471 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 UBE3DQ7Z6J8 389 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 FAAP24Q9BTP7 215 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 SCPEP1Q9HB40 452 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 F2RL2O00254 374 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 COX14Q96I36 57 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 CASP8AP2Q9UKL3 1982 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 ST8SIA5O15466 376 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 CCL3P10147 92 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 BMI1P35226 326 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 BLNKQ8WV28 456 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 SCN1AP35498 2009 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 ACOT6Q3I5F7 207 aaPredicted RBP10.12□□□□□ -0.79
TTC28-201ENST00000397906 LIMS2Q7Z4I7 341 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 SFTPA2Q8IWL1 248 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms