RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 OR4M2Q8NGB6 313 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 OR10R2Q8NGX6 335 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 FXYD6Q9H0Q3 95 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 METTL17Q9H7H0 456 aaPredicted RBP7.25□□□□□ -1.25
PTPRD-204ENST00000397606 MGAT4CQ9UBM8 478 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 ALPK2Q86TB3 2170 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 A0A0U1RQV5 110 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 SERPINE3A8MV23 424 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 PSMB1P20618 241 aaKnown RBP7.25□□□□□ -1.25
PTPRD-204ENST00000397606 IGF2-ASQ6U949 168 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 BEST4Q8NFU0 473 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 SLC25A40Q8TBP6 338 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 SLC39A7Q92504 469 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 MRPL22Q9NWU5 206 aaKnown RBP7.25□□□□□ -1.25
PTPRD-204ENST00000397606 CACNA1GO43497 2377 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 MEIKINA0A087WXM9 373 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 TMEM235A6NFC5 223 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 SULT1C2O00338 296 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 TOR1AO14656 332 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 HMGB3O15347 200 aaKnown RBP7.24□□□□□ -1.25
PTPRD-204ENST00000397606 LYPD3O95274 346 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 FUT3P21217 361 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 IL3RAP26951 378 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 CYCSP99999 105 aaKnown RBP7.24□□□□□ -1.25
PTPRD-204ENST00000397606 DBPQ10586 325 aaPredicted RBP7.24□□□□□ -1.25
PTPRD-204ENST00000397606 NRN1LQ496H8 165 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 ABLIM2Q6H8Q1 611 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 SLC36A1Q7Z2H8 476 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 OR56B4Q8NH76 319 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 ST7LQ8TDW4 575 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 ABHD5Q8WTS1 349 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 SLAMF9Q96A28 289 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 RBFOX1Q9NWB1 397 aaKnown RBP7.24□□□□□ -1.25
PTPRD-204ENST00000397606 B3GNT2Q9NY97 397 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 ATPIF1Q9UII2 106 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 KLHDC2Q9Y2U9 406 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 TMEM200CA6NKL6 621 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 CHRNB4P30926 498 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 PTGDSP41222 190 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 ZNF81P51508 661 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 AP2S1P53680 142 aaPredicted RBP7.24□□□□□ -1.25
PTPRD-204ENST00000397606 IL13RA1P78552 427 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 FGL1Q08830 312 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 C6orf183Q5T699 404 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 LINC01590Q5TEZ4 76 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 Q6ZS92 163 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 LHFPL6Q9Y693 200 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 OTOGLQ3ZCN5 2332 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 A0A0B4J203 849 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 KANTRA0A1W2PQU2 76 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 TSC22D1Q15714 1073 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 EIF5AL1Q6IS14 154 aaKnown RBP7.24□□□□□ -1.25
PTPRD-204ENST00000397606 MRGPRGQ86SM5 289 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 MRPS24Q96EL2 167 aaKnown RBP7.24□□□□□ -1.25
PTPRD-204ENST00000397606 SLC25A21Q9BQT8 299 aaPredicted RBP7.24□□□□□ -1.25
PTPRD-204ENST00000397606 TINAGQ9UJW2 476 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 KIAA1549LQ6ZVL6 1849 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 TEX46H3BTG2 121 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 ABCD4O14678 606 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 XRCC3O43542 346 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 TGM6O95932 706 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 ETV6P41212 452 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 GAS1P54826 345 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 INSL4Q14641 139 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 BTLAQ7Z6A9 289 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 SIAH3Q8IW03 269 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 FAM58AQ8N1B3 248 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 GABRG1Q8N1C3 465 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 LRRC75AQ8NAA5 344 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 OR52N4Q8NGI2 321 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 OR10J5Q8NHC4 309 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 TRMT61AQ96FX7 289 aaKnown RBP7.24□□□□□ -1.25
PTPRD-204ENST00000397606 RNF122Q9H9V4 155 aa7.24□□□□□ -1.25
PTPRD-204ENST00000397606 COL4A3Q01955 1670 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 TMEM82A0PJX8 343 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 OR5H1A6NKK0 313 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 TTRP02766 147 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 MST1P26927 711 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 MAGEB1P43366 347 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 UCP2P55851 309 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 LGALS4P56470 323 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 PNLIPRP3Q17RR3 467 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 PRSS45Q7RTY3 260 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 MRPL41Q8IXM3 137 aaKnown RBP7.23□□□□□ -1.25
PTPRD-204ENST00000397606 GALNT11Q8NCW6 608 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 C1orf162Q8NEQ5 155 aaPredicted RBP7.23□□□□□ -1.25
PTPRD-204ENST00000397606 ADAMTS17Q8TE56 1095 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 SECTM1Q8WVN6 248 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 SCMH1Q96GD3 660 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 MYOZ1Q9NP98 299 aaPredicted RBP7.23□□□□□ -1.25
PTPRD-204ENST00000397606 ZNF728P0DKX0 622 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 PLGLAQ15195 96 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 OR5A2Q8NGI9 324 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 OR52I2Q8NH67 350 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 OR2J1Q9GZK6 312 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 CHST5Q9GZS9 411 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 C12orf4Q9NQ89 552 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 ST6GALNAC2Q9UJ37 374 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 CACNA1BQ00975 2339 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 OR2AT4A6NND4 320 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms