RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ST8SIA5O15466 376 aa21.19■□□□□ 0.98
CSNK1E-203ENST00000396832 DXOO77932 396 aaKnown RBP21.19■□□□□ 0.98
CSNK1E-203ENST00000396832 OR2C1O95371 312 aa21.19■□□□□ 0.98
CSNK1E-203ENST00000396832 FHITP49789 147 aa21.19■□□□□ 0.98
CSNK1E-203ENST00000396832 NDUFA6P56556 154 aa21.19■□□□□ 0.98
CSNK1E-203ENST00000396832 ACTBL2Q562R1 376 aa21.19■□□□□ 0.98
CSNK1E-203ENST00000396832 PHOSPHO2Q8TCD6 241 aa21.19■□□□□ 0.98
CSNK1E-203ENST00000396832 MARS2Q96GW9 593 aaKnown RBP21.19■□□□□ 0.98
CSNK1E-203ENST00000396832 C5orf34Q96MH7 638 aa21.19■□□□□ 0.98
CSNK1E-203ENST00000396832 LPAR5Q9H1C0 372 aa21.19■□□□□ 0.98
CSNK1E-203ENST00000396832 KCNJ16Q9NPI9 418 aa21.19■□□□□ 0.98
CSNK1E-203ENST00000396832 A0A1B0GV90 55 aa21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 RPS2P15880 293 aaKnown RBP21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 CLEC9AQ6UXN8 241 aa21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 HEPN1Q6WQI6 88 aa21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 GTF3AQ92664 365 aaKnown RBP21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 FER1L5A0AVI2 2057 aa21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 IGKV3-11P04433 115 aa21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 OR13C7P0DN81 318 aa21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 CRABP1P29762 137 aa21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 OR3A4PP47883 348 aa21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 AADACL3Q5VUY0 350 aa21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 C14orf144Q96I85 54 aa21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 CUTCQ9NTM9 273 aa21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 FBXO7Q9Y3I1 522 aa21.18■□□□□ 0.98
CSNK1E-203ENST00000396832 FRYLO94915 3013 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 RAD51DO75771 328 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 CHRM2P08172 466 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 CDAP32320 146 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 UCP2P55851 309 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 RPS23P62266 143 aaKnown RBP21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 ZNF248Q8NDW4 579 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 LMX1AQ8TE12 382 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 GNRHR2Q96P88 292 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 NUDT16L1Q9BRJ7 211 aaKnown RBP21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 GAR1Q9NY12 217 aaKnown RBP21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 POLR1DQ9Y2S0 133 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 MT-ATP6P00846 226 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 KNG1P01042 644 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 MAS1LP35410 378 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 ZNF93P35789 620 aaPredicted RBP21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 CLINT1Q14677 625 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 DEFB133Q30KQ1 61 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 CARD17Q5XLA6 110 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 Q6ZS52 159 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 PNLDC1Q8NA58 520 aaKnown RBP21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 FAM71F1Q96KD3 344 aaPredicted RBP21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 SLC35B3Q9H1N7 401 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 ANAPC10Q9UM13 185 aa21.17■□□□□ 0.98
CSNK1E-203ENST00000396832 DANCRP0C864 163 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 CAMLGP49069 296 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 RAB1AP62820 205 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 RAP1AP62834 184 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 GLIPR1L1Q6UWM5 242 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 HIST2H3AQ71DI3 136 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 UBAC2Q8NBM4 344 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 ERGIC1Q969X5 290 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 SLAMF6Q96DU3 332 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 ST6GALNAC5Q9BVH7 336 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 WWTR1Q9GZV5 400 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 HDGFL3Q9Y3E1 203 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 ALG1L2C9J202 215 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 MS4A18H0YCH9 400 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 GSTP1P09211 210 aaKnown RBP21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 HIST1H1DP16402 221 aaKnown RBP21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 AMY2BP19961 511 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 OR3A2P47893 321 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 MS4A18Q3C1V0 323 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 RPUSD3Q6P087 351 aaKnown RBP21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 PRRX2Q99811 253 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 TPSD1Q9BZJ3 242 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 PBOV1Q9GZY1 135 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 LSM5Q9Y4Y9 91 aaKnown RBP21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 RALGAPA1Q6GYQ0 2036 aa21.16■□□□□ 0.98
CSNK1E-203ENST00000396832 H7C1Q1 480 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 NPIPB7O75200 414 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 DEDDO75618 318 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 GABRA4P48169 554 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 LCN10Q6JVE6 187 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 ABHD12BQ7Z5M8 362 aaPredicted RBP21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 LHFPL1Q86WI0 220 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 C11orf40Q8WZ69 217 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 MR1Q95460 341 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 ZDHHC12Q96GR4 267 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 YPEL4Q96NS1 127 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 PUS1Q9Y606 427 aaKnown RBP eCLIP21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 FIGNL2A6NMB9 653 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 TMEM50BP56557 158 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 ZNF574Q6ZN55 896 aaPredicted RBP21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 SSX9Q7RTT3 188 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 OR5D14Q8NGL3 314 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 PARPBPQ9NWS1 579 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 DOK5Q9P104 306 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 LUZP4Q9P127 313 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 OSGIN2Q9Y236 505 aa21.15■□□□□ 0.98
CSNK1E-203ENST00000396832 TSPAN2O60636 221 aa21.14■□□□□ 0.98
CSNK1E-203ENST00000396832 C1QL1O75973 258 aa21.14■□□□□ 0.98
CSNK1E-203ENST00000396832 MYF5P13349 255 aa21.14■□□□□ 0.98
CSNK1E-203ENST00000396832 BIDP55957 195 aa21.14■□□□□ 0.98
CSNK1E-203ENST00000396832 TLE3Q04726 772 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms