RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 EXOGQ9Y2C4 368 aaKnown RBP9.35□□□□□ -0.91
COL4A4-201ENST00000396625 MRPS2Q9Y399 296 aaKnown RBP9.35□□□□□ -0.91
COL4A4-201ENST00000396625 LMX1BO60663 402 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 PTHLHP12272 177 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 POLR2IP36954 125 aaKnown RBP9.35□□□□□ -0.91
COL4A4-201ENST00000396625 HIST3H3Q16695 136 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 C11orf87Q6NUJ2 197 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 CARFQ8N187 725 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM251Q8N6I4 163 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 TTC9BQ8N6N2 239 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 CALHM3Q86XJ0 350 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 LRRC15Q8TF66 581 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 STARD4Q96DR4 205 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 A0A096LPE4 126 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 A0A1W2PPZ6 126 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 IVDP26440 423 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 NKAIN1Q4KMZ8 207 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 PTRH1Q86Y79 214 aaKnown RBP9.35□□□□□ -0.91
COL4A4-201ENST00000396625 ZADH2Q8N4Q0 377 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 SIRT6Q8N6T7 355 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 ZDHHC16Q969W1 377 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 NAA60Q9H7X0 242 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 FAM157BP0CG42 384 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 TIAL1Q01085 375 aaKnown RBP eCLIP9.35□□□□□ -0.91
COL4A4-201ENST00000396625 PRSS42Q7Z5A4 293 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM99Q8N816 258 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 JAM3Q9BX67 310 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 SLC25A22Q9H936 323 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 OR5B21A6NL26 309 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 MELTFP08582 738 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 CEBPBP17676 345 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 OR2W3Q7Z3T1 314 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 RBM45Q8IUH3 476 aaKnown RBP9.35□□□□□ -0.91
COL4A4-201ENST00000396625 CLDN23Q96B33 292 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 EGLN2Q96KS0 407 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 UBTD1Q9HAC8 227 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 FGF2P09038 288 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 EPXP11678 715 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 NPEPL1Q8NDH3 523 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 OR1L6Q8NGR2 347 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 UBTD2Q8WUN7 234 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 PELI1Q96FA3 418 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 THOC3Q96J01 351 aaKnown RBP9.34□□□□□ -0.91
COL4A4-201ENST00000396625 C1QTNF6Q9BXI9 259 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 SLC7A10Q9NS82 523 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM127O75204 238 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 LRRC10Q5BKY1 277 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 PARS2Q7L3T8 475 aaKnown RBP9.34□□□□□ -0.91
COL4A4-201ENST00000396625 MOB3BQ86TA1 216 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 OR5C1Q8NGR4 320 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 ANAPC16Q96DE5 110 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 IL17CQ9P0M4 197 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 M0R082 166 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 DNPH1O43598 174 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 CD96P40200 585 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 ASCL1P50553 236 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 MEGF10Q96KG7 1140 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 TBX15Q96SF7 602 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 CD82P27701 267 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 KLRB1Q12918 225 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 OR1L1Q8NH94 360 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM40Q8WWA1 233 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 H3BNC9 293 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 FKBP2P26885 142 aaKnown RBP9.34□□□□□ -0.91
COL4A4-201ENST00000396625 SOX4Q06945 474 aaPredicted RBP9.34□□□□□ -0.91
COL4A4-201ENST00000396625 PNLIPRP3Q17RR3 467 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 PDPNQ86YL7 162 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 FAM24BQ8N5W8 94 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 Q96M85 177 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 PAAF1Q9BRP4 392 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 CDCA4Q9BXL8 241 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 OR2D2Q9H210 308 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 OR2T8A6NH00 312 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 LYZL6O75951 148 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 ACP1P24666 158 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 RPL30P62888 115 aaKnown RBP9.34□□□□□ -0.91
COL4A4-201ENST00000396625 REC114Q7Z4M0 266 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 FER1L6-AS2Q96M78 137 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 FKBP11Q9NYL4 201 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 CLDN34H7C241 214 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 CORTO00230 105 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 SLC35E2P0CK97 266 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 CST5P28325 142 aaPredicted RBP9.34□□□□□ -0.91
COL4A4-201ENST00000396625 GABRA6Q16445 453 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 CTRCQ99895 268 aa9.34□□□□□ -0.91
COL4A4-201ENST00000396625 GFRA2O00451 464 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 RAB29O14966 203 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 HRO43593 1189 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 KRASP01116 189 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 KIR2DS2P43631 304 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 CCL11P51671 97 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 ERVS71-1P61550 626 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 SLC38A11Q08AI6 406 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 ALKBH6Q3KRA9 238 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 ATOH8Q96SQ7 321 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 RSG1Q9BU20 258 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 EMC6Q9BV81 110 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 UQCC1Q9NVA1 299 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 PITPNC1Q9UKF7 332 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 R4GMQ9 66 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms