RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 BRICD5Q6PL45 260 aa13.48□□□□□ -0.25
CLTA-203ENST00000396603 METAP1DQ6UB28 335 aaPredicted RBP13.48□□□□□ -0.25
CLTA-203ENST00000396603 DHRSXQ8N5I4 330 aa13.48□□□□□ -0.25
CLTA-203ENST00000396603 GCSAMQ8N6F7 178 aa13.48□□□□□ -0.25
CLTA-203ENST00000396603 KIR3DL3Q8N743 410 aa13.48□□□□□ -0.25
CLTA-203ENST00000396603 SETD9Q8NE22 299 aa13.48□□□□□ -0.25
CLTA-203ENST00000396603 C12orf43Q96C57 262 aaKnown RBP13.48□□□□□ -0.25
CLTA-203ENST00000396603 C1orf123Q9NWV4 160 aa13.48□□□□□ -0.25
CLTA-203ENST00000396603 CLN6Q9NWW5 311 aa13.48□□□□□ -0.25
CLTA-203ENST00000396603 CAB39Q9Y376 341 aaPredicted RBP13.48□□□□□ -0.25
CLTA-203ENST00000396603 A0A1B0GVI7 797 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 E9PQ18 207 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 C3orf80F5H4A9 247 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 CLPXO76031 633 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 H2BFMP0C1H6 154 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 CFL1P23528 166 aaKnown RBP13.47□□□□□ -0.25
CLTA-203ENST00000396603 PRSS12P56730 875 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 IL18R1Q13478 541 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 CDONQ4KMG0 1287 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 MIDNQ504T8 468 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 GLYATL3Q5SZD4 288 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 RUSC1-AS1Q66K80 236 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 SFRP4Q6FHJ7 346 aaPredicted RBP13.47□□□□□ -0.25
CLTA-203ENST00000396603 DEGS2Q6QHC5 323 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 GDPGP1Q6ZNW5 385 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 KRT77Q7Z794 578 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 C19orf18Q8NEA5 215 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 CYGBQ8WWM9 190 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 DPAGT1Q9H3H5 408 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 SMURF1Q9HCE7 757 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 DNAJC27Q9NZQ0 273 aa13.47□□□□□ -0.25
CLTA-203ENST00000396603 ANKRD30BLA7E2S9 258 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 ZNF670-ZNF695F2Z2N8 137 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 ZNF254O75437 659 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 MRPL3P09001 348 aaKnown RBP13.46□□□□□ -0.25
CLTA-203ENST00000396603 ALOX5APP20292 161 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 IER3P46695 156 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 RIPK1Q13546 671 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 MICBQ29980 383 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 BTN2A1Q7KYR7 527 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 FAM90A1Q86YD7 464 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 LY6G5BQ8NDX9 201 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 OR56B2PQ8NGI1 322 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 OR2AE1Q8NHA4 323 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 MRPL48Q96GC5 212 aaKnown RBP13.46□□□□□ -0.25
CLTA-203ENST00000396603 MROQ9BYG7 248 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 DNTTIP1Q9H147 329 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 CNTD2Q9H8S5 307 aa13.46□□□□□ -0.25
CLTA-203ENST00000396603 RPUSD1Q9UJJ7 312 aaKnown RBP13.46□□□□□ -0.25
CLTA-203ENST00000396603 A0A0G2JK05 382 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 A6NLC8 198 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 H0YAE9 185 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 H0YJX3 145 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 DVL1O14640 695 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 OR2T7P0C7T2 308 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 OPRL1P41146 370 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 CX3CR1P49238 355 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 ACTC1P68032 377 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 ACTA1P68133 377 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 GUCA2AQ02747 115 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 SLC36A1Q7Z2H8 476 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 BCDIN3DQ7Z5W3 292 aaKnown RBP13.45□□□□□ -0.26
CLTA-203ENST00000396603 SLC35F2Q8IXU6 374 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 FTMTQ8N4E7 242 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 OR52H1Q8NGJ2 320 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 OR51G2Q8NGK0 314 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 OR2T27Q8NH04 317 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 OR8S1Q8NH09 359 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 RHOXF1Q8NHV9 184 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 TAF15Q92804 592 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLTA-203ENST00000396603 ADGRL4Q9HBW9 690 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 RNF114Q9Y508 228 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 HSPE1-MOB4S4R3N1 261 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 VWFP04275 2813 aa13.45□□□□□ -0.26
CLTA-203ENST00000396603 hCG_1807616A0A1W2PRN6 198 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 RRP9O43818 475 aaKnown RBP13.44□□□□□ -0.26
CLTA-203ENST00000396603 GPR137BO60478 399 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 ENTPD6O75354 484 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 GYPAP02724 150 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 GRPP07492 148 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 DCTDP32321 178 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 CAPGP40121 348 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 PRKXP51817 358 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 IL5RAQ01344 420 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 ROM1Q03395 351 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 ENTHD1Q8IYW4 607 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 CMTM4Q8IZR5 234 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 BOLLQ8N9W6 283 aaKnown RBP13.44□□□□□ -0.26
CLTA-203ENST00000396603 ZSCAN4Q8NAM6 433 aaPredicted RBP13.44□□□□□ -0.26
CLTA-203ENST00000396603 SCCPDHQ8NBX0 429 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 LINC01006Q8NI28 216 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 LHX4Q969G2 390 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 ADI1Q9BV57 179 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 TLNRD1Q9H1K6 362 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 RGCCQ9H4X1 137 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 C16orf95Q9H693 158 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 ABCB9Q9NP78 766 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 NKX1-2Q9UD57 310 aaPredicted RBP13.44□□□□□ -0.26
CLTA-203ENST00000396603 IKZF2Q9UKS7 526 aa13.44□□□□□ -0.26
CLTA-203ENST00000396603 ACOD1A6NK06 481 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms