RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 ASB17Q8WXJ9 295 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 RPL3LQ92901 407 aaKnown RBP13.49□□□□□ -0.25
DDR1-229ENST00000396342 RAB3IPQ96QF0 476 aaPredicted RBP13.49□□□□□ -0.25
DDR1-229ENST00000396342 CITED1Q99966 193 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 NIPSNAP1Q9BPW8 284 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 TLNRD1Q9H1K6 362 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 RAB18Q9NP72 206 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 H2AFY2Q9P0M6 372 aaPredicted RBP13.49□□□□□ -0.25
DDR1-229ENST00000396342 NLKQ9UBE8 527 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 TRBV23-1A0A0A0MS06 115 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 OR2AT4A6NND4 320 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 SLC1A7O00341 560 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 AKR7A2O43488 359 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 OSMP13725 252 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 TGM4P49221 684 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 GPM6AP51674 278 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 UBE2E1P51965 193 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 RIPPLY1Q0D2K3 151 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 STUMQ69YW2 141 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 Q6ZTK2 550 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 C11orf53Q8IXP5 236 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 OR51G2Q8NGK0 314 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 LINC01006Q8NI28 216 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 DNAJC9Q8WXX5 260 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 HEXA-AS1Q9H8Q6 139 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 RASL12Q9NYN1 266 aa13.48□□□□□ -0.25
DDR1-229ENST00000396342 TMEM269A0A1B0GVZ9 245 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 A0A1W2PRD5 423 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 A0A1W2PRF3 423 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 A0A1W2PRM7 423 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 OR5B21A6NL26 309 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 H3BUI4 141 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 SELENOFO60613 162 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 PSKH1P11801 424 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 LGALS4P56470 323 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 CAV3P56539 151 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 SNAPC1Q16533 368 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 SMIM21Q3B7S5 101 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 ZNF684Q5T5D7 378 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 C11orf88Q6PI97 169 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 DEGS2Q6QHC5 323 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 WDR86Q86TI4 376 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 CPOQ8IVL8 374 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 FAM185AQ8N0U4 392 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 C8orf46Q8TAG6 207 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 RBM4BQ9BQ04 359 aaKnown RBP13.47□□□□□ -0.25
DDR1-229ENST00000396342 YIPF3Q9GZM5 350 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 C1orf21Q9H246 121 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 ZNRD1Q9P1U0 126 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 ENPP5Q9UJA9 477 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 IKZF2Q9UKS7 526 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 GTF2A1LQ9UNN4 478 aa13.47□□□□□ -0.25
DDR1-229ENST00000396342 A0A0U1RQV5 110 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 SLC22A31A6NKX4 558 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 AQP12BA6NM10 295 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 ZNF732B4DXR9 585 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 SIGLEC5O15389 551 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 ZNF254O75437 659 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 CLPXO76031 633 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 FAM107AO95990 144 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 ACAA1P09110 424 aaPredicted RBP13.46□□□□□ -0.25
DDR1-229ENST00000396342 GABRA5P31644 462 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 RIDAP52758 137 aaKnown RBP13.46□□□□□ -0.25
DDR1-229ENST00000396342 ESRRGP62508 458 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 RELBQ01201 579 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 CEACAM21Q3KPI0 293 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 PLCXD3Q63HM9 321 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 ZNF788Q6ZQV5 615 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 MOB3CQ70IA8 216 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 PRSS45Q7RTY3 260 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 SPATA24Q86W54 205 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 AQP12AQ8IXF9 295 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 ZSCAN4Q8NAM6 433 aaPredicted RBP13.46□□□□□ -0.25
DDR1-229ENST00000396342 OR8B12Q8NGG6 310 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 OR5A2Q8NGI9 324 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 OR4C13Q8NGP0 309 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 DUS3LQ96G46 650 aaKnown RBP13.46□□□□□ -0.25
DDR1-229ENST00000396342 THTPAQ9BU02 230 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 C16orf95Q9H693 158 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 VNN3Q9NY84 501 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 POLDIP2Q9Y2S7 368 aa13.46□□□□□ -0.25
DDR1-229ENST00000396342 ANGPTL7O43827 346 aa13.45□□□□□ -0.26
DDR1-229ENST00000396342 SAA4P35542 130 aa13.45□□□□□ -0.26
DDR1-229ENST00000396342 GYS2P54840 703 aa13.45□□□□□ -0.26
DDR1-229ENST00000396342 CBX1P83916 185 aa13.45□□□□□ -0.26
DDR1-229ENST00000396342 SRSF4Q08170 494 aaKnown RBP13.45□□□□□ -0.26
DDR1-229ENST00000396342 APOFQ13790 326 aa13.45□□□□□ -0.26
DDR1-229ENST00000396342 ZBTB37Q5TC79 503 aa13.45□□□□□ -0.26
DDR1-229ENST00000396342 ZNF573Q86YE8 665 aa13.45□□□□□ -0.26
DDR1-229ENST00000396342 CLPTM1LQ96KA5 538 aa13.45□□□□□ -0.26
DDR1-229ENST00000396342 WDR13Q9H1Z4 485 aa13.45□□□□□ -0.26
DDR1-229ENST00000396342 PPA2Q9H2U2 334 aa13.45□□□□□ -0.26
DDR1-229ENST00000396342 LRP12Q9Y561 859 aa13.45□□□□□ -0.26
DDR1-229ENST00000396342 CSF1P09603 554 aa13.44□□□□□ -0.26
DDR1-229ENST00000396342 MS4A2Q01362 244 aa13.44□□□□□ -0.26
DDR1-229ENST00000396342 FLOT2Q14254 428 aa13.44□□□□□ -0.26
DDR1-229ENST00000396342 OR2T6Q8NHC8 308 aa13.44□□□□□ -0.26
DDR1-229ENST00000396342 ANGPTL6Q8NI99 470 aa13.44□□□□□ -0.26
DDR1-229ENST00000396342 SEH1LQ96EE3 360 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms