RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 C11orf87Q6NUJ2 197 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 C1orf210Q8IVY1 113 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 OR10G3Q8NGC4 313 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 OR52N4Q8NGI2 321 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 HMGCLL1Q8TB92 370 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 NEIL1Q96FI4 390 aaPredicted RBP4.9□□□□□ -1.63
VPS13C-204ENST00000395898 RAB18Q9NP72 206 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF586Q9NXT0 402 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 DBX1A6NMT0 343 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 IGFBP1P08833 259 aaPredicted RBP4.9□□□□□ -1.63
VPS13C-204ENST00000395898 POU2F2P09086 479 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 FGF7P21781 194 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 PTGFRP43088 359 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 CDK5Q00535 292 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 NCR3LG1Q68D85 454 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 BATF2Q8N1L9 274 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM18Q96B42 140 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 IL21Q9HBE4 155 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 KLK11Q9UBX7 282 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 MTCH2Q9Y6C9 303 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 ANKRD34CP0C6C1 535 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 PCBP4P57723 403 aaKnown RBP4.9□□□□□ -1.63
VPS13C-204ENST00000395898 PJVKQ0ZLH3 352 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 OR5I1Q13606 314 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 JMJD6Q6NYC1 403 aaPredicted RBP4.9□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM179BQ7Z7N9 219 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 DEFB108BQ8NET1 73 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 OR13C5Q8NGS8 318 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 C10orf35Q96D05 121 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 DERL3Q96Q80 235 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 ALKBH3Q96Q83 286 aaPredicted RBP4.9□□□□□ -1.63
VPS13C-204ENST00000395898 ADGRL4Q9HBW9 690 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 HES4Q9HCC6 221 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 MYOZ1Q9NP98 299 aaPredicted RBP4.9□□□□□ -1.63
VPS13C-204ENST00000395898 YTHDF2Q9Y5A9 579 aaKnown RBP4.9□□□□□ -1.63
VPS13C-204ENST00000395898 A0A0B4J2E0 115 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 A0A1B0GX12 115 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 K7EQS6 105 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 CD37P11049 281 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 FPR2P25090 351 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 B4GALNT1Q00973 533 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 CD300LDQ6UXZ3 194 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 BCL7CQ8WUZ0 217 aaPredicted RBP4.9□□□□□ -1.63
VPS13C-204ENST00000395898 SMIM7Q9BQ49 75 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 ADAT1Q9BUB4 502 aaKnown RBP4.9□□□□□ -1.63
VPS13C-204ENST00000395898 CLCF1Q9UBD9 225 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 WNK3Q9BYP7 1800 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 TO15178 435 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 FAHP16930 419 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 ERVFC1-1P60608 527 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 PPP1CAP62136 330 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF90Q03938 601 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 LURAP1Q96LR2 239 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 GPR87Q9BY21 358 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 STRCP1A6NGW2 1772 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 A0A1W2PN81 502 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 CDAP32320 146 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 CHRNA7P36544 502 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 OR11G2Q8NGC1 345 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 SEBOXQ9HB31 216 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 EXOGQ9Y2C4 368 aaKnown RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 SBF1O95248 1867 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 PRSS44E7EML9 344 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 B3GALNT1O75752 331 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 GLI4P10075 376 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 KIAA0141Q14154 515 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 LCN15Q6UWW0 184 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 NHLRC1Q6VVB1 395 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 NUDCD2Q8WVJ2 157 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 NTNG2Q96CW9 530 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 OR2A5Q96R48 311 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 VN1R1Q9GZP7 353 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 GLRX2Q9NS18 164 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 SLC22A13Q9Y226 551 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 DOCK6Q96HP0 2047 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF816Q0VGE8 651 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 COMMD1Q8N668 190 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF680Q8NEM1 530 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 OR4C16Q8NGL9 310 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 ROBO4Q8WZ75 1007 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 MCHR2Q969V1 340 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 ADGRG7Q96K78 797 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 OR6C3Q9NZP0 311 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 SBF2Q86WG5 1849 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 NCBP2LA6PVI3 153 aaKnown RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 PEX11BO96011 259 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 ACSM4P0C7M7 580 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 SLC25A4P12235 298 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 CEACAM3P40198 252 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 PRRX1P54821 245 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 SUMO1P63165 101 aaKnown RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 OR2B11Q5JQS5 317 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 WDR34Q96EX3 536 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 MYEOVQ96EZ4 313 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 GABRA1P14867 456 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 FOXF1Q12946 379 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 VMA21Q3ZAQ7 101 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF561Q8N587 486 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 GPR32P1Q8NGA4 272 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 TMED6Q8WW62 240 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms