RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PIGPP57054 158 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 ZNF266Q14584 549 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 PRRX2Q99811 253 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 UQCC1Q9NVA1 299 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 PURGQ9UJV8 347 aaKnown RBP10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 FAM96BQ9Y3D0 163 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 TRIM77I1YAP6 450 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 NAT1P18440 290 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 OTX2P32243 289 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 FOLR3P41439 243 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 NAAAQ02083 359 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 LYSMD4Q5XG99 296 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 MRPL21Q7Z2W9 205 aaKnown RBP10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 ESX1Q8N693 406 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 KCNK17Q96T54 332 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 PCED1AQ9H1Q7 454 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 G6PC2Q9NQR9 355 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 PUS1Q9Y606 427 aaKnown RBP eCLIP10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 HEATR5AQ86XA9 2040 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 SFTA3P0C7M3 94 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 OMGP23515 440 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 NXPH1P58417 271 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 FNDC7Q5VTL7 733 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 TMPPEQ6ZT21 453 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 GLRX5Q86SX6 157 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 LFNGQ8NES3 379 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 CADM4Q8NFZ8 388 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 OR6X1Q8NH79 312 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 RTN4IP1Q8WWV3 396 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 PIGQQ9BRB3 760 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 PRR13Q9NZ81 148 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 AUP1Q9Y679 476 aa10.34□□□□□ -0.75
UBE2D3-209ENST00000394804 FAM74A7A6NL05 159 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 DHRS3O75911 302 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 BCKDHBP21953 392 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 CALCRP30988 508 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 CLINT1Q14677 625 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 FAM74A3Q4VXF1 159 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 RHBDD2Q6NTF9 364 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 CBLN2Q8IUK8 224 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 SECTM1Q8WVN6 248 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 SPACA1Q9HBV2 294 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 LPAR3Q9UBY5 353 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 TXNL1O43396 289 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 SERPINE2P07093 398 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 ZNF44P15621 663 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 RPL7L1Q6DKI1 246 aaKnown RBP10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 SLC22A25Q6T423 547 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 HOGA1Q86XE5 327 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 ZNF285Q96NJ3 590 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 NELFAQ9H3P2 528 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 MYOTQ9UBF9 498 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 IGHMP01871 453 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 PLGLB1Q02325 96 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 SURF2Q15527 256 aaPredicted RBP10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 VAX1Q5SQQ9 334 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 WDR5BQ86VZ2 330 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 HLA-CQ95604 372 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 PAPOLGQ9BWT3 736 aaKnown RBP10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 LPAR5Q9H1C0 372 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 TRAV14DV4A0A0A6YYC5 116 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 SSX5O60225 188 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 CD37P11049 281 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 EPHA1P21709 976 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 RAB13P51153 203 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 MKXQ8IYA7 352 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 EIF4E3Q8N5X7 224 aaKnown RBP10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 RRNAD1Q96FB5 475 aaKnown RBP10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 UBE2ZQ9H832 354 aaPredicted RBP10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 CLEC1BQ9P126 229 aa10.33□□□□□ -0.76
UBE2D3-209ENST00000394804 A0A087WZY1 265 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 MS4A18H0YCH9 400 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 SLC33A1O00400 549 aaPredicted RBP10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 ANGPTL7O43827 346 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 MELTFP08582 738 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 EXT1Q16394 746 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 MS4A18Q3C1V0 323 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 KIRREL1Q96J84 757 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 C20orf24Q9BUV8 137 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 SEC11CQ9BY50 192 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 B4GALT7Q9UBV7 327 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 KCNS2Q9ULS6 477 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 STRAPQ9Y3F4 350 aaKnown RBP10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 IGHV3-15A0A0B4J1V0 119 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 KCNAB3O43448 404 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 XRCC2O43543 280 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 RPS10P46783 165 aaKnown RBP10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 STK11Q15831 433 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 ZNF813Q6ZN06 617 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 C6orf201Q7Z4U5 140 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 RPS19BP1Q86WX3 136 aaKnown RBP10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 SKA3Q8IX90 412 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 SUMF1Q8NBK3 374 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 AGBL5Q8NDL9 886 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 ST7LQ8TDW4 575 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 SPSB1Q96BD6 273 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 LIN37Q96GY3 246 aaPredicted RBP10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 CLCC1Q96S66 551 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 FBXL17Q9UF56 701 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 FBXO7Q9Y3I1 522 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms