RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ODF4Q2M2E3 257 aa25.55■■□□□ 1.68
CMTM4-202ENST00000394106 CEACAM21Q3KPI0 293 aa25.55■■□□□ 1.68
CMTM4-202ENST00000394106 PLCXD3Q63HM9 321 aa25.55■■□□□ 1.68
CMTM4-202ENST00000394106 KRT74Q7RTS7 529 aa25.55■■□□□ 1.68
CMTM4-202ENST00000394106 CCL13Q99616 98 aa25.55■■□□□ 1.68
CMTM4-202ENST00000394106 SLC29A1Q99808 456 aa25.55■■□□□ 1.68
CMTM4-202ENST00000394106 GMPPBQ9Y5P6 360 aa25.55■■□□□ 1.68
CMTM4-202ENST00000394106 ENSAO43768 121 aaKnown RBP25.54■■□□□ 1.68
CMTM4-202ENST00000394106 MTNR1AP48039 350 aa25.54■■□□□ 1.68
CMTM4-202ENST00000394106 GNG3P63215 75 aa25.54■■□□□ 1.68
CMTM4-202ENST00000394106 FAM76BQ5HYJ3 339 aa25.54■■□□□ 1.68
CMTM4-202ENST00000394106 ZBTB37Q5TC79 503 aa25.54■■□□□ 1.68
CMTM4-202ENST00000394106 CD276Q5ZPR3 534 aa25.54■■□□□ 1.68
CMTM4-202ENST00000394106 ZBTB49Q6ZSB9 765 aa25.54■■□□□ 1.68
CMTM4-202ENST00000394106 OR10Z1Q8NGY1 313 aa25.54■■□□□ 1.68
CMTM4-202ENST00000394106 RNFT2Q96EX2 444 aa25.54■■□□□ 1.68
CMTM4-202ENST00000394106 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.54■■□□□ 1.68
CMTM4-202ENST00000394106 DNAJB11Q9UBS4 358 aa25.54■■□□□ 1.68
CMTM4-202ENST00000394106 AASSQ9UDR5 926 aa25.54■■□□□ 1.68
CMTM4-202ENST00000394106 IGHV3OR16-10A0A075B7F0 116 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 A0A1B0GTI1 187 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 E9PQ18 207 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 DVL1O14640 695 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 AKR7A2O43488 359 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 HILS1P60008 231 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 WDR38Q5JTN6 314 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 ZNF684Q5T5D7 378 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 USP43Q70EL4 1123 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 OR5T2Q8NGG2 359 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 STMN2Q93045 179 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 WDR13Q9H1Z4 485 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 SNTG1Q9NSN8 517 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 ZNF69Q9UC07 566 aa25.53■■□□□ 1.68
CMTM4-202ENST00000394106 A0A1B0GW55 424 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 SULT1C4O75897 302 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 NRASP01111 189 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 DUX4L2P0CJ85 424 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 DUX4L3P0CJ86 424 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 DUX4L4P0CJ87 422 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 DUX4L5P0CJ88 424 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 DUX4L6P0CJ89 424 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 DUX4L7P0CJ90 424 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 ZNF85Q03923 595 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 OCLNQ16625 522 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 SLC25A30Q5SVS4 291 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 MEDAGQ5VYS4 303 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 DUX4L9Q6RFH8 374 aaPredicted RBP25.52■■□□□ 1.68
CMTM4-202ENST00000394106 FAM220AQ7Z4H9 259 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 CATSPERDQ86XM0 798 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 OR5A2Q8NGI9 324 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 ST8SIA4Q92187 359 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 RORBQ92753 470 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 OR51I2Q9H344 312 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 KAAG1Q9UBP8 84 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 DUX4Q9UBX2 424 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 GNG8Q9UK08 70 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 V9GYS6 101 aa25.52■■□□□ 1.68
CMTM4-202ENST00000394106 A6NIN4 97 aa25.51■■□□□ 1.67
CMTM4-202ENST00000394106 OR5B21A6NL26 309 aa25.51■■□□□ 1.67
CMTM4-202ENST00000394106 H3BSH0 61 aa25.51■■□□□ 1.67
CMTM4-202ENST00000394106 RHBDL1O75783 438 aa25.51■■□□□ 1.67
CMTM4-202ENST00000394106 PPIAL4GP0DN37 164 aa25.51■■□□□ 1.67
CMTM4-202ENST00000394106 FGF12P61328 243 aa25.51■■□□□ 1.67
CMTM4-202ENST00000394106 TP53I3Q53FA7 332 aa25.51■■□□□ 1.67
CMTM4-202ENST00000394106 DOK3Q7L591 496 aa25.51■■□□□ 1.67
CMTM4-202ENST00000394106 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP25.51■■□□□ 1.67
CMTM4-202ENST00000394106 UPRTQ96BW1 309 aa25.51■■□□□ 1.67
CMTM4-202ENST00000394106 C12orf43Q96C57 262 aaKnown RBP25.51■■□□□ 1.67
CMTM4-202ENST00000394106 JMJD8Q96S16 334 aa25.51■■□□□ 1.67
CMTM4-202ENST00000394106 GPR173Q9NS66 373 aa25.51■■□□□ 1.67
CMTM4-202ENST00000394106 FCN3O75636 299 aa25.5■■□□□ 1.67
CMTM4-202ENST00000394106 IGHV4-38-2P0DP08 117 aa25.5■■□□□ 1.67
CMTM4-202ENST00000394106 CLVS2Q5SYC1 327 aa25.5■■□□□ 1.67
CMTM4-202ENST00000394106 SLC36A1Q7Z2H8 476 aa25.5■■□□□ 1.67
CMTM4-202ENST00000394106 BCL6BQ8N143 479 aaPredicted RBP25.5■■□□□ 1.67
CMTM4-202ENST00000394106 FAM216BQ8N7L0 139 aa25.5■■□□□ 1.67
CMTM4-202ENST00000394106 OR14K1Q8NGZ2 314 aa25.5■■□□□ 1.67
CMTM4-202ENST00000394106 MS4A7Q9GZW8 240 aaPredicted RBP25.5■■□□□ 1.67
CMTM4-202ENST00000394106 ACOXLQ9NUZ1 547 aa25.5■■□□□ 1.67
CMTM4-202ENST00000394106 TRAV40A0A0B4J280 105 aa25.49■■□□□ 1.67
CMTM4-202ENST00000394106 A0A1B0GVI7 797 aa25.49■■□□□ 1.67
CMTM4-202ENST00000394106 ACTC1P68032 377 aa25.49■■□□□ 1.67
CMTM4-202ENST00000394106 ACTA1P68133 377 aa25.49■■□□□ 1.67
CMTM4-202ENST00000394106 STUMQ69YW2 141 aa25.49■■□□□ 1.67
CMTM4-202ENST00000394106 HAGHLQ6PII5 290 aaPredicted RBP25.49■■□□□ 1.67
CMTM4-202ENST00000394106 BTN2A1Q7KYR7 527 aa25.49■■□□□ 1.67
CMTM4-202ENST00000394106 FGFRL1Q8N441 504 aa25.49■■□□□ 1.67
CMTM4-202ENST00000394106 DAPL1A0PJW8 107 aa25.48■■□□□ 1.67
CMTM4-202ENST00000394106 SNTNA6NMZ2 147 aa25.48■■□□□ 1.67
CMTM4-202ENST00000394106 IKZF1Q13422 519 aa25.48■■□□□ 1.67
CMTM4-202ENST00000394106 RBMS3Q6XE24 437 aaKnown RBP25.48■■□□□ 1.67
CMTM4-202ENST00000394106 ENTHD1Q8IYW4 607 aa25.48■■□□□ 1.67
CMTM4-202ENST00000394106 SIGLECL1Q8N7X8 197 aa25.48■■□□□ 1.67
CMTM4-202ENST00000394106 PNLDC1Q8NA58 520 aaKnown RBP25.48■■□□□ 1.67
CMTM4-202ENST00000394106 PCGF1Q9BSM1 259 aa25.48■■□□□ 1.67
CMTM4-202ENST00000394106 NKX6-3A6NJ46 265 aa25.47■■□□□ 1.67
CMTM4-202ENST00000394106 TRIM77I1YAP6 450 aa25.47■■□□□ 1.67
CMTM4-202ENST00000394106 SYT7O43581 403 aa25.47■■□□□ 1.67
CMTM4-202ENST00000394106 TFF1P04155 84 aa25.47■■□□□ 1.67
CMTM4-202ENST00000394106 CCL1P22362 96 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms