RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 CCNKO75909 580 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 PIAS1O75925 651 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 ABCB11O95342 1321 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 RAB3DO95716 219 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 SNAI1O95863 264 aaPredicted RBP2.04□□□□□ -2.08
PTPRC-205ENST00000391970 C3P01024 1663 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 FGGP02679 453 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 GUSBP08236 651 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 GNAO1P09471 354 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 CD3GP09693 182 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 STAG3L3P0CL85 134 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 PSG2P11465 335 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 MUC1P15941 1255 aaPredicted RBP2.04□□□□□ -2.08
PTPRC-205ENST00000391970 CD40LGP29965 261 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 CA5AP35218 305 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 ETV6P41212 452 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 RPS10P46783 165 aaKnown RBP2.04□□□□□ -2.08
PTPRC-205ENST00000391970 SLC11A1P49279 550 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 SRP9P49458 86 aaKnown RBP2.04□□□□□ -2.08
PTPRC-205ENST00000391970 LHX2P50458 406 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 CCR8P51685 355 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 ACLYP53396 1101 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 CRISP3P54108 245 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 RBX1P62877 108 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 CNTNAP1P78357 1384 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 SEMG2Q02383 582 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 LIPEQ05469 1076 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 PAPPAQ13219 1627 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 SMCO1Q147U7 214 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 TRAM2Q15035 370 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 PON2Q15165 354 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 USF2Q15853 346 aaPredicted RBP2.04□□□□□ -2.08
PTPRC-205ENST00000391970 GUCA2BQ16661 112 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 GOLGA7BQ2TAP0 167 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 VPS26BQ4G0F5 336 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 ACSBG2Q5FVE4 666 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 PABPC1L2AQ5JQF8 200 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 TMEM255AQ5JRV8 349 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 COA6Q5JTJ3 125 aaKnown RBP2.04□□□□□ -2.08
PTPRC-205ENST00000391970 CLLU1Q5K131 121 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 OGFRL1Q5TC84 451 aaPredicted RBP2.04□□□□□ -2.08
PTPRC-205ENST00000391970 PRAMEF20Q5VT98 475 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 MFSD14CQ5VZR4 134 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 LRRC66Q68CR7 880 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 CYB5R2Q6BCY4 276 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 IGFL2Q6UWQ7 119 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 ZNF836Q6ZNA1 936 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 NRKQ7Z2Y5 1582 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 RBBP6Q7Z6E9 1792 aaKnown RBP2.04□□□□□ -2.08
PTPRC-205ENST00000391970 LUZP2Q86TE4 346 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 SYCE1Q8N0S2 351 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 UBL4BQ8N7F7 174 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 TOPAZ1Q8N9V7 1692 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 TMEM35BQ8NCS4 154 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 OR1M1Q8NGA1 313 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 OR4M2Q8NGB6 313 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 OR2D3Q8NGH3 330 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 OR51G1Q8NGK1 321 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 OR5M1Q8NGP8 315 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 OR1S2Q8NGQ3 325 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 ZFAND1Q8TCF1 268 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 SDR42E1Q8WUS8 393 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 TMEM54Q969K7 222 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 ISOC1Q96CN7 298 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 AURKBQ96GD4 344 aaPredicted RBP2.04□□□□□ -2.08
PTPRC-205ENST00000391970 ZNF799Q96GE5 643 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 FOPNLQ96NB1 174 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 WFIKKN1Q96NZ8 548 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 TEAD3Q99594 435 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 PRRT1Q99946 306 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 CHID1Q9BWS9 393 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 OR51B6Q9H340 312 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 CWH43Q9H720 699 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 KIR3DX1Q9H7L2 352 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 RNF122Q9H9V4 155 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 XPNPEP1Q9NQW7 623 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 CTPS2Q9NRF8 586 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 NRBP2Q9NSY0 501 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 BABAM2Q9NXR7 383 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 ZNF226Q9NYT6 803 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 PTTG3PQ9NZH4 202 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 OR12D3Q9UGF7 316 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 SCN11AQ9UI33 1791 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 LSM7Q9UK45 103 aaKnown RBP2.04□□□□□ -2.08
PTPRC-205ENST00000391970 DIP2CQ9Y2E4 1556 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 HEBP2Q9Y5Z4 205 aa2.04□□□□□ -2.08
PTPRC-205ENST00000391970 FER1L6Q2WGJ9 1857 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 RGPD2P0DJD1 1756 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 PEAK1Q9H792 1746 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 C5P01031 1676 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 PXDNLA1KZ92 1463 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 PTPRMP28827 1452 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 EDC4Q6P2E9 1401 aaKnown RBP2.03□□□□□ -2.08
PTPRC-205ENST00000391970 C10orf71Q711Q0 1435 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 NFASCO94856 1347 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 USP42Q9H9J4 1324 aaKnown RBP2.03□□□□□ -2.08
PTPRC-205ENST00000391970 TRBV6-6A0A0A6YYG2 114 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 A0A0B4J2A0 478 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 GNG14A0A1W2PPG7 69 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 GSTTP1A0A1W2PQM5 241 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms