RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 MS4A6EQ96DS6 147 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 ST6GALNAC2Q9UJ37 374 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 ETV7Q9Y603 341 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 TRBV2A0A0J9YWF9 115 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 A0A1W2PRS3 328 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 GRXCR1A8MXD5 290 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 P2RX6O15547 441 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 TMEM225BP0DP42 221 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 AOAHP28039 575 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 KHKP50053 298 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 RND2P52198 227 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 HLA-DRB3P79483 266 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 TMPRSS12Q86WS5 348 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF683Q8IZ20 524 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 C19orf53Q9UNZ5 99 aaPredicted RBP8.32□□□□□ -1.08
PTPRA-204ENST00000380393 RBFOX3A6NFN3 312 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 GJE1A6NN92 205 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 RNASET2O00584 256 aaKnown RBP8.32□□□□□ -1.08
PTPRA-204ENST00000380393 PIN1P1O15428 100 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 WNT11O96014 354 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 TIMP1P01033 207 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 PSMB10P40306 273 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF260Q3ZCT1 412 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 AMZ1Q400G9 498 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 TCEAL5Q5H9L2 206 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 FAM213BQ8TBF2 198 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 SMIM19Q96E16 107 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 SMDT1Q9H4I9 107 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 WFDC1Q9HC57 220 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF107Q9UII5 783 aaPredicted RBP8.32□□□□□ -1.08
PTPRA-204ENST00000380393 HIF3AQ9Y2N7 669 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 RFNGQ9Y644 331 aa8.32□□□□□ -1.08
PTPRA-204ENST00000380393 CEBPDP49716 269 aaPredicted RBP8.31□□□□□ -1.08
PTPRA-204ENST00000380393 ERVS71-1P61550 626 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 RAB32Q13637 225 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 CDK5R1Q15078 307 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 ELOCQ15369 112 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 PRSS8Q16651 343 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 WDR25Q64LD2 544 aaPredicted RBP8.31□□□□□ -1.08
PTPRA-204ENST00000380393 DPPA3Q6W0C5 159 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 CRIPAKQ8N1N5 446 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 SLC46A1Q96NT5 459 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 NUDT9Q9BW91 350 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 INPP5EQ9NRR6 644 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 PSG11Q9UQ72 335 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 FUT9Q9Y231 359 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 TMED7Q9Y3B3 224 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 KCNE1BA0A087WTH5 132 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 A0A087WUU8 490 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF736B4DX44 427 aaPredicted RBP8.31□□□□□ -1.08
PTPRA-204ENST00000380393 TLX3O43711 291 aaPredicted RBP8.31□□□□□ -1.08
PTPRA-204ENST00000380393 CYB5AP00167 134 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 IL2RAP01589 272 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 SRP19P09132 144 aaKnown RBP8.31□□□□□ -1.08
PTPRA-204ENST00000380393 PTGER1P34995 402 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 RPS11P62280 158 aaKnown RBP eCLIP8.31□□□□□ -1.08
PTPRA-204ENST00000380393 PDCD11Q14690 1871 aaKnown RBP8.31□□□□□ -1.08
PTPRA-204ENST00000380393 RFLNAQ6ZTI6 216 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 MBOAT2Q6ZWT7 520 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 C2orf73Q8N5S3 287 aaPredicted RBP8.31□□□□□ -1.08
PTPRA-204ENST00000380393 OR10S1Q8NGN2 331 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 OR1N2Q8NGR9 330 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 SLC38A5Q8WUX1 472 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 RSPO3Q9BXY4 272 aaPredicted RBP8.31□□□□□ -1.08
PTPRA-204ENST00000380393 SLC46A2Q9BY10 475 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 NMNAT2Q9BZQ4 307 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 ELL3Q9HB65 397 aaPredicted RBP8.31□□□□□ -1.08
PTPRA-204ENST00000380393 C5AR2Q9P296 337 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 B4DEV8 164 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 MT-CO2P00403 227 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 CXCL10P02778 98 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 PET100P0DJ07 73 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 FCGR2CP31995 323 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 SGSHP51688 502 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 TAS2R50P59544 299 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF85Q03923 595 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 KIAA0895LQ68EN5 471 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 ANKRD16Q6P6B7 361 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 OPN5Q6U736 354 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 OR2T33Q8NG76 320 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 C11orf40Q8WZ69 217 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 MAGEH1Q9H213 219 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 PDFQ9HBH1 243 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 SIRT3Q9NTG7 399 aaPredicted RBP8.31□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF581Q9P0T4 197 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 UQCR10Q9UDW1 63 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 IKZF2Q9UKS7 526 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 SLC45A2Q9UMX9 530 aa8.31□□□□□ -1.08
PTPRA-204ENST00000380393 TRIOBPQ9H2D6 2365 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 OR5B21A6NL26 309 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 OR2AG2A6NM03 316 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 G3V3Y1 287 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 LEFTY2O00292 366 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 RAMP3O60896 148 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 NTN1O95631 604 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 GAPDHP04406 335 aaKnown RBP8.3□□□□□ -1.08
PTPRA-204ENST00000380393 CLEC3BP05452 202 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 MMP9P14780 707 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 CD22P20273 847 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 PAX2Q02962 417 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms