RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 ING5Q8WYH8 240 aa5.9□□□□□ -1.46
CDKAL1-202ENST00000378610 ANKRD9Q96BM1 317 aaPredicted RBP5.9□□□□□ -1.46
CDKAL1-202ENST00000378610 DAZAP1Q96EP5 407 aaKnown RBP5.9□□□□□ -1.46
CDKAL1-202ENST00000378610 BSCL2Q96G97 398 aaPredicted RBP5.9□□□□□ -1.46
CDKAL1-202ENST00000378610 HIST1H2BLQ99880 126 aa5.9□□□□□ -1.46
CDKAL1-202ENST00000378610 SLC35B3Q9H1N7 401 aa5.9□□□□□ -1.46
CDKAL1-202ENST00000378610 TMEM242Q9NWH2 141 aa5.9□□□□□ -1.46
CDKAL1-202ENST00000378610 ABT1Q9ULW3 272 aaKnown RBP5.9□□□□□ -1.46
CDKAL1-202ENST00000378610 KCNIP3Q9Y2W7 256 aa5.9□□□□□ -1.46
CDKAL1-202ENST00000378610 AMDHD2Q9Y303 409 aa5.9□□□□□ -1.46
CDKAL1-202ENST00000378610 MEIS3P1A6NDR6 274 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 CGB1A6NKQ9 187 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 ZNF726A6NNF4 738 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 SFT2D2O95562 160 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 ERCC1P07992 297 aaPredicted RBP5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 DAOP14920 347 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 NAA10P41227 235 aaPredicted RBP5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 GATMP50440 423 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 POLR2LP62875 67 aaKnown RBP5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 CSNK1G2P78368 415 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 RBPJQ06330 500 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 RASGEF1BQ0VAM2 473 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 PMPCAQ10713 525 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 CLINT1Q14677 625 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 PCK2Q16822 640 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 FAM46CQ5VWP2 391 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 Q6ZRG5 221 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 OR51A4Q8NGJ6 313 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 MS4A6EQ96DS6 147 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 SF3B5Q9BWJ5 86 aaKnown RBP5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 TTTY10Q9BZA0 68 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 PCBD2Q9H0N5 130 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 RGCCQ9H4X1 137 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 CDH20Q9HBT6 801 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 GPR35Q9HC97 309 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 GPR132Q9UNW8 380 aa5.9□□□□□ -1.47
CDKAL1-202ENST00000378610 DNAH12Q6ZR08 3092 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 CCL15-CCL14A0A0B4J2E2 113 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 LNP1A1A4G5 178 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 H7C1Q1 480 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 DCTN6O00399 190 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 TGOLN2O43493 480 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 SRSF10O75494 262 aaKnown RBP5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 JTBO76095 146 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 NDUFB2O95178 105 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 CYB5AP00167 134 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 HIST1H1TP22492 207 aaPredicted RBP5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 AQP2P41181 271 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 CD200P41217 278 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 RND2P52198 227 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 RPL15P61313 204 aaKnown RBP5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 MRPS11P82912 194 aaKnown RBP5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 FOXF1Q12946 379 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 CCL15Q16663 113 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 ACTBL2Q562R1 376 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 TMEM128Q5BJH2 165 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 VAX1Q5SQQ9 334 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 MRPL2Q5T653 305 aaKnown RBP5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 GFI1BQ5VTD9 330 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 OR2A2Q6IF42 318 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 TMEM220Q6QAJ8 160 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 CDK20Q8IZL9 346 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 GPR137CQ8N3F9 429 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 SLC16A11Q8NCK7 471 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 OR5L2Q8NGL0 311 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 OR10AC1Q8NH08 325 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 OR4K15Q8NH41 348 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 C4orf45Q96LM5 186 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 CITED1Q99966 193 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 KCNK15Q9H427 330 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 RNF181Q9P0P0 153 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 SIT1Q9Y3P8 196 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 HS3ST3B1Q9Y662 390 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 FANCMQ8IYD8 2048 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 UMAD1C9J7I0 102 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 ETV2O00321 342 aaPredicted RBP5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 STK17BO94768 372 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 PMP2P02689 132 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 SNRPCP09234 159 aaKnown RBP5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 CSNK2A2P19784 350 aaPredicted RBP5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 CXCR1P25024 350 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 TDGF1P3P51864 188 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 SPOCK1Q08629 439 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 MOGAT2Q3SYC2 334 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 C9orf50Q5SZB4 431 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 THEM4Q5T1C6 240 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 CST9Q5W186 159 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 OPN5Q6U736 354 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 CLEC9AQ6UXN8 241 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 ADGRE4PQ86SQ3 457 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 LHFPL1Q86WI0 220 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 C17orf64Q86WR6 236 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 OR7G2Q8NG99 324 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 OR9A2Q8NGT5 310 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 OR5K2Q8NHB8 316 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 TMEM106AQ96A25 262 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 SNHG12Q9BXW3 62 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 C5orf66Q9H5L9 145 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 WDR45Q9Y484 360 aa5.89□□□□□ -1.47
CDKAL1-202ENST00000378610 MMACHCQ9Y4U1 282 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms