RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 GSK3AP49840 483 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 FOXF1Q12946 379 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 PPP1R1AQ13522 171 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 SPANXN5Q5MJ07 72 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 ZNF787Q6DD87 383 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 PRSS54Q6PEW0 395 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 MITD1Q8WV92 249 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 REEP6Q96HR9 211 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 ZNF816-ZNF321PA0A0X1KG74 233 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 LEUTXA8MZ59 168 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 C2CD4DB7Z1M9 353 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 SSSCA1O60232 199 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 WDR1O75083 606 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 GFERP55789 205 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 FUT7Q11130 342 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 GUK1Q16774 197 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 LTC4SQ16873 150 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 LRRTM1Q86UE6 522 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 THNSL2Q86YJ6 484 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 TMEM123Q8N131 208 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 OR4D11Q8NGI4 311 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 PTP4A1Q93096 173 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 PINX1Q96BK5 328 aaKnown RBP7.51□□□□□ -1.21
VPS36-201ENST00000378060 PIK3IP1Q96FE7 263 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 CXorf58Q96LI9 332 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 SMIM7Q9BQ49 75 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 ZNF426Q9BUY5 554 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 TMEM265A0A087WTH1 108 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 CSF2RBP32927 897 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 SSTP61278 116 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 ACOT6Q3I5F7 207 aaPredicted RBP7.51□□□□□ -1.21
VPS36-201ENST00000378060 ZNF705AQ6ZN79 300 aaPredicted RBP7.51□□□□□ -1.21
VPS36-201ENST00000378060 SLC25A26Q70HW3 274 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 BPIFCQ8NFQ6 507 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 RXFP4Q8TDU9 374 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 TMEM18Q96B42 140 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 OPA3Q9H6K4 179 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 NGBQ9NPG2 151 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 SIT1Q9Y3P8 196 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 TICRRQ7Z2Z1 1910 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 GPR31O00270 319 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 CBR3O75828 277 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 PRAMEF5Q5TYX0 476 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 PRAMEF6Q5VXH4 476 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 DRAM2Q6UX65 266 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 CARFQ8N187 725 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 ZFP62Q8NB50 900 aaPredicted RBP7.51□□□□□ -1.21
VPS36-201ENST00000378060 OR5M9Q8NGP3 310 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 HPSE2Q8WWQ2 592 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 TGIF2Q9GZN2 237 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 PCED1AQ9H1Q7 454 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 OPN4Q9UHM6 478 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 CCDC88CQ9P219 2028 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 HS3ST1O14792 307 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 SFTA3P0C7M3 94 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 METTL15P1P0C7V9 234 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 FAHP16930 419 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 ABCD3P28288 659 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 HOXD11P31277 338 aaPredicted RBP7.5□□□□□ -1.21
VPS36-201ENST00000378060 CSRP3P50461 194 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 ZNF117Q03924 483 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 SCGB2A2Q13296 93 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 YRDCQ86U90 279 aaKnown RBP7.5□□□□□ -1.21
VPS36-201ENST00000378060 RBMXL3Q8N7X1 1067 aaKnown RBP7.5□□□□□ -1.21
VPS36-201ENST00000378060 BHLHE23Q8NDY6 225 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 RDH5Q92781 318 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 SPACA9Q96E40 222 aaPredicted RBP7.5□□□□□ -1.21
VPS36-201ENST00000378060 PRKNO60260 465 aaPredicted RBP7.5□□□□□ -1.21
VPS36-201ENST00000378060 OR2J2O76002 312 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 CT45A6P0DMU7 189 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 CT45A5P0DMU8 189 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 CT45A7P0DMV0 189 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 CT45A8P0DMV1 189 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 CT45A9P0DMV2 189 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 ABOP16442 354 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 CXCL3P19876 107 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 SURF2Q15527 256 aaPredicted RBP7.5□□□□□ -1.21
VPS36-201ENST00000378060 CT45A2Q5DJT8 189 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 ARSJQ5FYB0 599 aaPredicted RBP7.5□□□□□ -1.21
VPS36-201ENST00000378060 CT45A1Q5HYN5 189 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 TMEM91Q6ZNR0 172 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 CT45A3Q8NHU0 189 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 MAFAQ8NHW3 353 aaPredicted RBP7.5□□□□□ -1.21
VPS36-201ENST00000378060 HLA-CQ95604 372 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 AKR1E2Q96JD6 320 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 IP6K3Q96PC2 410 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 TXN2Q99757 166 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 OR51I2Q9H344 312 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 ZNF331Q9NQX6 463 aaPredicted RBP7.5□□□□□ -1.21
VPS36-201ENST00000378060 FBXO34Q9NWN3 711 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 FAM186AA6NE01 2351 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 EFSO43281 561 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 MBTPS2O43462 519 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 ZFP36L2P47974 494 aaKnown RBP7.5□□□□□ -1.21
VPS36-201ENST00000378060 KISS1Q15726 138 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 BTNL8Q6UX41 500 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 ZDHHC23Q8IYP9 409 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 ZNF75AQ96N20 296 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 TOLLIPQ9H0E2 274 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 MRM2Q9UI43 246 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 787.6 ms