RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 OR4F5Q8NH21 305 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 BTF3L4Q96K17 158 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 OR4F4Q96R69 305 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 ZNF331Q9NQX6 463 aaPredicted RBP12.16□□□□□ -0.46
GPC6-201ENST00000377047 ZNF785A8K8V0 405 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 DHRS3O75911 302 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 EML2O95834 649 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 CD160O95971 181 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 GIPP09681 153 aaPredicted RBP12.15□□□□□ -0.46
GPC6-201ENST00000377047 OR4E1P0C645 316 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 EPXP11678 715 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 GUCA2AQ02747 115 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 HMGCLL1Q8TB92 370 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 FBXW5Q969U6 566 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 C20orf24Q9BUV8 137 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 IL20Q9NYY1 176 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 RBP4P02753 201 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 CBR1P16152 277 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 AVPR2P30518 371 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 HAGHQ16775 308 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 FAM122CQ6P4D5 195 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 TREM2Q9NZC2 230 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 ZNF141Q15928 474 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 STPG1Q5TH74 334 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 OR4S1Q8NGB4 309 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 GNPNAT1Q96EK6 184 aaPredicted RBP12.15□□□□□ -0.46
GPC6-201ENST00000377047 RHNO1Q9BSD3 238 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 DUSP21Q9H596 190 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 GLRX2Q9NS18 164 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 OR2F2O95006 317 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 OR3A4PP47883 348 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 KISS1Q15726 138 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 TOR2AQ5JU69 321 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 NPEPL1Q8NDH3 523 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 OR8U1Q8NH10 309 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 TVP23CQ96ET8 276 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 GAB2Q9UQC2 676 aa12.15□□□□□ -0.46
GPC6-201ENST00000377047 CLEC18AA5D8T8 446 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 OR5H14A6NHG9 310 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 OR5H1A6NKK0 313 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 E5RGE8 158 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 TAAR5O14804 337 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 DCTDP32321 178 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 KIAA0040Q15053 153 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 C12orf73Q69YU5 71 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 MAMSTRQ6ZN01 415 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 CLEC18CQ8NCF0 446 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 LFNGQ8NES3 379 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 OR52N4Q8NGI2 321 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 OR6S1Q8NH40 331 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 RFESDQ8TAC1 157 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 RAB1CQ92928 201 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 NSG2Q9Y328 171 aa12.15□□□□□ -0.47
GPC6-201ENST00000377047 A0A0A6YYJ9 748 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 TRAV1-2A0A0B4J238 106 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 A0A1W2PRD5 423 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 A0A1W2PRF3 423 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 A0A1W2PRM7 423 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 FGF7P21781 194 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 RPL12P30050 165 aaKnown RBP12.14□□□□□ -0.47
GPC6-201ENST00000377047 MARC2Q969Z3 335 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 OR6C68A6NDL8 312 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 AGFG2O95081 481 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 METTL15P1P0C7V9 234 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 PSMB6P28072 239 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 ASCL1P50553 236 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 ZNF425Q6IV72 752 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 TUSC5Q8IXB3 177 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 TMEM123Q8N131 208 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 CXXC4Q9H2H0 198 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 SLC17A2O00624 439 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 OIP5O43482 229 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 JTBO76095 146 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 MT-ND4LP03901 98 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 ASAH1Q13510 395 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 MISP3Q96FF7 219 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 MCM3APO60318 1980 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 ACTL6AO96019 429 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 OR5I1Q13606 314 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 NUFIP2Q7Z417 695 aaKnown RBP12.14□□□□□ -0.47
GPC6-201ENST00000377047 GPR32P1Q8NGA4 272 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 RCL1Q9Y2P8 373 aaKnown RBP12.14□□□□□ -0.47
GPC6-201ENST00000377047 BOLA1Q9Y3E2 137 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 URGCP-MRPS24S4R325 110 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 OR2M5A3KFT3 312 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 EVX1P49640 407 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 CDH26Q8IXH8 852 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 SCARB1Q8WTV0 552 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 GAL3ST2Q9H3Q3 398 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 SCN1AP35498 2009 aa12.14□□□□□ -0.47
GPC6-201ENST00000377047 GPR31O00270 319 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 MPZL1O95297 269 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 RAC3P60763 192 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 GPNMBQ14956 572 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 CLPPQ16740 277 aaPredicted RBP12.13□□□□□ -0.47
GPC6-201ENST00000377047 PSG11Q9UQ72 335 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 IGHV3-43A0A0B4J1X8 118 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 CHEK1O14757 476 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 CYTIPO60759 359 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 IGHV3-43DP0DP04 118 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms