RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 OR51A4Q8NGJ6 313 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 SCARB1Q8WTV0 552 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 SLC25A28Q96A46 364 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 FOXRED1Q96CU9 486 aaPredicted RBP10.81□□□□□ -0.68
VRK3-202ENST00000377011 ELMOD3Q96FG2 381 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 AMELYQ99218 206 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 C12orf49Q9H741 205 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 R4GMQ9 66 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 TRAV18A0A075B6X5 111 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 A0A1B0GW55 424 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 LOC390937A0A1W2PQ73 354 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 F5H5P2 479 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 SIAH2O43255 324 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 DOK2O60496 412 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 SLC16A7O60669 478 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 SS18L1O75177 396 aaPredicted RBP10.8□□□□□ -0.68
VRK3-202ENST00000377011 SRSF10O75494 262 aaKnown RBP10.8□□□□□ -0.68
VRK3-202ENST00000377011 RP2O75695 350 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 PMS2P2O95744 297 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 SPARCP09486 303 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 DUX4L2P0CJ85 424 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 DUX4L3P0CJ86 424 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 DUX4L4P0CJ87 422 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 DUX4L5P0CJ88 424 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 DUX4L6P0CJ89 424 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 DUX4L7P0CJ90 424 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 VSIG10L2P0DP72 767 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 GTF2F2P13984 249 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 PPP3CBP16298 524 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 CXCL2P19875 107 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 RAB6AP20340 208 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 AGTR1P30556 359 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 MYBPHQ13203 477 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 ZMYND11Q15326 602 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 ZNF704Q6ZNC4 412 aaPredicted RBP10.8□□□□□ -0.68
VRK3-202ENST00000377011 FAM214BQ7L5A3 538 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 PRRG4Q9BZD6 226 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 CHIAQ9BZP6 476 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 DUX4Q9UBX2 424 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 PFDN2Q9UHV9 154 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 HHLA2Q9UM44 414 aa10.8□□□□□ -0.68
VRK3-202ENST00000377011 TMEM272A0A1B0GTI8 110 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 MFSD2BA6NFX1 497 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 C11orf98E9PRG8 122 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 H3BUI4 141 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 LDLRAD4O15165 306 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 HRGP04196 525 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 HTR2CP28335 458 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 DAP3P51398 398 aaKnown RBP10.79□□□□□ -0.68
VRK3-202ENST00000377011 ADAM8P78325 824 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 EIF2B1Q14232 305 aaKnown RBP10.79□□□□□ -0.68
VRK3-202ENST00000377011 C1orf100Q5SVJ3 147 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 RGS7BPQ6MZT1 257 aaPredicted RBP10.79□□□□□ -0.68
VRK3-202ENST00000377011 FAAP20Q6NZ36 180 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 STEAP1BQ6NZ63 245 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 C3orf33Q6P1S2 294 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 LHFPL5Q8TAF8 219 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 LURAP1Q96LR2 239 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 ABHD6Q9BV23 337 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 REG4Q9BYZ8 158 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 KLHL13Q9P2N7 655 aa10.79□□□□□ -0.68
VRK3-202ENST00000377011 MCTS1Q9ULC4 181 aaKnown RBP10.79□□□□□ -0.68
VRK3-202ENST00000377011 ALPK2Q86TB3 2170 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 FTCDNL1E5RQL4 147 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 SCGNO76038 276 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 SYNGR4O95473 234 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 ACSM4P0C7M7 580 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 UBCP0CG48 685 aaKnown RBP10.78□□□□□ -0.68
VRK3-202ENST00000377011 PTHLHP12272 177 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 CTLA4P16410 223 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 MPZP25189 248 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 EFNB2P52799 333 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 PLA2G7Q13093 441 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 HLXQ14774 488 aaPredicted RBP10.78□□□□□ -0.68
VRK3-202ENST00000377011 TMEM244Q5VVB8 128 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 ASPHD2Q6ICH7 369 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 OR2A2Q6IF42 318 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 RAB12Q6IQ22 244 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 LPCAT3Q6P1A2 487 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 TMPPEQ6ZT21 453 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 OVCH2Q7RTZ1 564 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 GABRG1Q8N1C3 465 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 EIF4E3Q8N5X7 224 aaKnown RBP10.78□□□□□ -0.68
VRK3-202ENST00000377011 MFSD8Q8NHS3 518 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 SLC25A36Q96CQ1 311 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 C14orf79Q96F83 325 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 ATG5Q9H1Y0 275 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 FANCFQ9NPI8 374 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 SDHAF2Q9NX18 166 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 LRP12Q9Y561 859 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 MSTNO14793 375 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 PNPP00491 289 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 CD74P04233 296 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 RLN1P04808 185 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 RPA2P15927 270 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 ZNF823P16415 610 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 APOBEC1P41238 236 aaKnown RBP10.78□□□□□ -0.68
VRK3-202ENST00000377011 RPS27P42677 84 aaKnown RBP10.78□□□□□ -0.68
VRK3-202ENST00000377011 RAC3P60763 192 aa10.78□□□□□ -0.68
VRK3-202ENST00000377011 SRSF4Q08170 494 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms