RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 FXYD6-FXYD2A0A087WZ82 144 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 RGS11O94810 467 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 IL2RAP01589 272 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 IFNA6P05013 189 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 CD34P28906 385 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 FOXG1P55316 489 aaPredicted RBP18.86■□□□□ 0.61
RNF39-202ENST00000376751 ARFRP1Q13795 201 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 TRIP6Q15654 476 aaKnown RBP18.86■□□□□ 0.61
RNF39-202ENST00000376751 FAM189A2Q15884 450 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 PABPC1L2AQ5JQF8 200 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 C9orf135Q5VTT2 229 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 LYG2Q86SG7 212 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 HOGA1Q86XE5 327 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 IL22RA1Q8N6P7 574 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 FXYD6Q9H0Q3 95 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 hCG_38984A0A1B0GV85 526 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 ARPC5O15511 151 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 NME2P1O60361 137 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 SP1P08047 785 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 EDN3P14138 238 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 NME2P22392 152 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 MTCP1P56278 107 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 ARF1P84077 181 aaKnown RBP18.86■□□□□ 0.61
RNF39-202ENST00000376751 SORDQ00796 357 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 ZNF92Q03936 586 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 CPEB3Q8NE35 698 aaKnown RBP18.86■□□□□ 0.61
RNF39-202ENST00000376751 OR5M8Q8NGP6 311 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 MARCH1Q8TCQ1 289 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 PCNPQ8WW12 178 aaKnown RBP18.86■□□□□ 0.61
RNF39-202ENST00000376751 MAFIPQ8WZ33 124 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 CITED4Q96RK1 184 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 LINC00470Q9BZP3 86 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 IRF2BPLQ9H1B7 796 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 CALHM2Q9HA72 323 aa18.86■□□□□ 0.61
RNF39-202ENST00000376751 NOP16Q9Y3C1 178 aaKnown RBP18.86■□□□□ 0.61
RNF39-202ENST00000376751 CELSR3Q9NYQ7 3312 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 TRAV14DV4A0A0A6YYC5 116 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 FAM230AA0A1W2PPH8 454 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 RPS10-NUDT3A0A1W2PQS6 291 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 HMSDA8MTL9 139 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 CCSO14618 274 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 ANGPTL7O43827 346 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 PPP3CBP16298 524 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 IKZF1Q13422 519 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 TGIF1Q15583 401 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 VAX1Q5SQQ9 334 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 SPSB1Q96BD6 273 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 IP6K3Q96PC2 410 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 FAM117AQ9C073 453 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 LIPGQ9Y5X9 500 aa18.85■□□□□ 0.61
RNF39-202ENST00000376751 C9orf170A2RU37 121 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 OR6C65A6NJZ3 312 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 SPRY1O43609 319 aaPredicted RBP18.84■□□□□ 0.61
RNF39-202ENST00000376751 SYNGR4O95473 234 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 IFNA7P01567 189 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 TMEM225BP0DP42 221 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 FAM3AP98173 230 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 TMEM42Q69YG0 159 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 LIN54Q6MZP7 749 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 SUMF1Q8NBK3 374 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 Q96M66 194 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 FER1L6-AS2Q96M78 137 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 S100A13Q99584 98 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 FAM186AA6NE01 2351 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 ZNF587BE7ETH6 402 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 ZNHIT1O43257 154 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 EFSO43281 561 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 NOS1APO75052 506 aaPredicted RBP18.84■□□□□ 0.61
RNF39-202ENST00000376751 PLATP00750 562 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 ZNF581Q9P0T4 197 aa18.84■□□□□ 0.61
RNF39-202ENST00000376751 A0A096LPE4 126 aa18.83■□□□□ 0.61
RNF39-202ENST00000376751 A0A1W2PPZ6 126 aa18.83■□□□□ 0.61
RNF39-202ENST00000376751 FARS2O95363 451 aaKnown RBP18.83■□□□□ 0.61
RNF39-202ENST00000376751 AMY2BP19961 511 aa18.83■□□□□ 0.61
RNF39-202ENST00000376751 CPT2P23786 658 aa18.83■□□□□ 0.61
RNF39-202ENST00000376751 CBX5P45973 191 aa18.83■□□□□ 0.61
RNF39-202ENST00000376751 GK2Q14410 553 aaPredicted RBP18.83■□□□□ 0.61
RNF39-202ENST00000376751 ACTBL2Q562R1 376 aa18.83■□□□□ 0.61
RNF39-202ENST00000376751 PIP4P1Q86T03 277 aa18.83■□□□□ 0.61
RNF39-202ENST00000376751 ASB13Q8WXK3 278 aa18.83■□□□□ 0.61
RNF39-202ENST00000376751 ST6GALNAC5Q9BVH7 336 aa18.83■□□□□ 0.61
RNF39-202ENST00000376751 UBQLN2Q9UHD9 624 aa18.83■□□□□ 0.61
RNF39-202ENST00000376751 KLF13Q9Y2Y9 288 aaPredicted RBP18.83■□□□□ 0.61
RNF39-202ENST00000376751 ARHGAP21Q5T5U3 1957 aa18.83■□□□□ 0.6
RNF39-202ENST00000376751 LINC00862A6NCI5 91 aa18.82■□□□□ 0.6
RNF39-202ENST00000376751 ARGFXA6NJG6 315 aa18.82■□□□□ 0.6
RNF39-202ENST00000376751 LEUTXA8MZ59 168 aa18.82■□□□□ 0.6
RNF39-202ENST00000376751 MSTNO14793 375 aa18.82■□□□□ 0.6
RNF39-202ENST00000376751 GALR2O43603 387 aaPredicted RBP18.82■□□□□ 0.6
RNF39-202ENST00000376751 AKR1C4P17516 323 aa18.82■□□□□ 0.6
RNF39-202ENST00000376751 GABRR1P24046 479 aa18.82■□□□□ 0.6
RNF39-202ENST00000376751 PPIAP62937 165 aaKnown RBP18.82■□□□□ 0.6
RNF39-202ENST00000376751 HLXQ14774 488 aaPredicted RBP18.82■□□□□ 0.6
RNF39-202ENST00000376751 CNN3Q15417 329 aaKnown RBP18.82■□□□□ 0.6
RNF39-202ENST00000376751 NRN1LQ496H8 165 aa18.82■□□□□ 0.6
RNF39-202ENST00000376751 CLVS2Q5SYC1 327 aa18.82■□□□□ 0.6
RNF39-202ENST00000376751 TMUB2Q71RG4 321 aa18.82■□□□□ 0.6
RNF39-202ENST00000376751 C6orf201Q7Z4U5 140 aa18.82■□□□□ 0.6
RNF39-202ENST00000376751 OR5H2Q8NGV7 314 aa18.82■□□□□ 0.6
RNF39-202ENST00000376751 TERB2Q8NHR7 220 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms