RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 CYB561A3Q8NBI2 242 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 OR10Z1Q8NGY1 313 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 OR51A7Q8NH64 312 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 OR1L1Q8NH94 360 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 NDNFQ8TB73 568 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 MITD1Q8WV92 249 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 C17orf50Q8WW18 174 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 TMEM234Q8WY98 164 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 ING5Q8WYH8 240 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 ZNF75CPQ92670 426 aaPredicted RBP1.15□□□□□ -2.22
VPS13A-206ENST00000376646 CENPNQ96H22 339 aaPredicted RBP1.15□□□□□ -2.22
VPS13A-206ENST00000376646 RNF170Q96K19 258 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 ALS2CR12Q96Q35 445 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 OR51B5Q9H339 312 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 VAX2Q9UIW0 290 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 PPIL1Q9Y3C6 166 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 BZW2Q9Y6E2 419 aaKnown RBP1.15□□□□□ -2.22
VPS13A-206ENST00000376646 C2orf16Q68DN1 1984 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 MROH5Q6ZUA9 1318 aa1.15□□□□□ -2.22
VPS13A-206ENST00000376646 IGLV2-18A0A075B6J9 118 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 IGLV3-12A0A075B6K2 115 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 CCL15-CCL14A0A0B4J2E2 113 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 MYL12BO14950 172 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 POLR1CO15160 346 aaPredicted RBP1.15□□□□□ -2.23
VPS13A-206ENST00000376646 UPK1BO75841 260 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 SLC35G6P0C7Q6 338 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 CD28P10747 220 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 CD9P21926 228 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 GNRHRP30968 328 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 NUP62P37198 522 aaPredicted RBP1.15□□□□□ -2.23
VPS13A-206ENST00000376646 GALR1P47211 349 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 ATP5J2P56134 94 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 CCL15Q16663 113 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 CPTPQ5TA50 214 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 MFSD14CQ5VZR4 134 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 DUPD1Q68J44 220 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 SLC25A34Q6PIV7 304 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 ZNF101Q8IZC7 436 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 SLC7A5P1Q8MH63 180 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 ZCCHC24Q8N2G6 241 aaKnown RBP1.15□□□□□ -2.23
VPS13A-206ENST00000376646 RNF182Q8N6D2 247 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 TMEM105Q8N8V8 129 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 OR4M2Q8NGB6 313 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 OR1S1Q8NH92 325 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 ENKURQ8TC29 256 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 FAM131CQ96AQ9 280 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 SULT4A1Q9BR01 284 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 UTP23Q9BRU9 249 aaKnown RBP1.15□□□□□ -2.23
VPS13A-206ENST00000376646 ZNF2Q9BSG1 426 aaPredicted RBP1.15□□□□□ -2.23
VPS13A-206ENST00000376646 MARVELD1Q9BSK0 173 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 CHCHD7Q9BUK0 85 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 TM6SF2Q9BZW4 377 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 TAS2R5Q9NYW4 299 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 COL1A2P08123 1366 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 SCN1AP35498 2009 aa1.15□□□□□ -2.23
VPS13A-206ENST00000376646 IGKV1D-17A0A075B6S4 117 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 TRAV8-4A0A0B4J246 113 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 TRAV8-6A0A0B4J262 113 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 IGHV2OR16-5A0A0B4J2B6 119 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 BTNL10A8MVZ5 291 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 H7C2Y5 167 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 J3QT63 122 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 LGALS9O00182 355 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 RFXANKO14593 260 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 P01737 135 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 HTR2CP28335 458 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 TAS2R43P59537 309 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 RPL31P62899 125 aaKnown RBP1.14□□□□□ -2.23
VPS13A-206ENST00000376646 C2orf54Q08AI8 447 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 PRSS8Q16651 343 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 LUZP6Q538Z0 58 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 FAM27D1Q5T7N8 215 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 THOC7Q6I9Y2 204 aaKnown RBP1.14□□□□□ -2.23
VPS13A-206ENST00000376646 C16orf87Q6PH81 154 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 UNQ9165/PRO28630Q6UXU0 137 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 FAM58AQ8N1B3 248 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 LRRC52Q8N7C0 313 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 LINC00469Q8N7U9 141 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 OR13C9Q8NGT0 318 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 PHF10Q8WUB8 498 aaKnown RBP1.14□□□□□ -2.23
VPS13A-206ENST00000376646 RTN4IP1Q8WWV3 396 aaPredicted RBP1.14□□□□□ -2.23
VPS13A-206ENST00000376646 CACNG8Q8WXS5 425 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 S100PBPQ96BU1 408 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 GPR82Q96P67 336 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 TSNAXQ99598 290 aaKnown RBP1.14□□□□□ -2.23
VPS13A-206ENST00000376646 ING2Q9H160 280 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 ANKHQ9HCJ1 492 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 S4R3C0 116 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 V9GYY9 64 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 AQRO60306 1485 aaKnown RBP eCLIP1.14□□□□□ -2.23
VPS13A-206ENST00000376646 IGHV1-3A0A0C4DH29 117 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 ISPDA4D126 451 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 TVP23AA6NH52 213 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 K7EN84 100 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 PAX6P26367 422 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 IL3RAP26951 378 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 MLF1P58340 268 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 TAS2R60P59551 318 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 PPP1CAP62136 330 aa1.14□□□□□ -2.23
VPS13A-206ENST00000376646 KLHL12Q53G59 568 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms