RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 HTRA4P83105 476 aaPredicted RBP16.29■□□□□ 0.2
SNX27-202ENST00000368841 C19orf57Q0VDD7 668 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 Q3ZCU0 254 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 OR1L3Q8NH93 324 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 PIGMQ9H3S5 423 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 PDE4DIPQ5VU43 2346 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 HPP00738 406 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 HOXB3P14651 431 aaPredicted RBP16.29■□□□□ 0.2
SNX27-202ENST00000368841 LFNGQ8NES3 379 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 CNRIP1Q96F85 164 aaPredicted RBP16.29■□□□□ 0.2
SNX27-202ENST00000368841 LPAR2Q9HBW0 351 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 RER1O15258 196 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 ZNHIT1O43257 154 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 COX5AP20674 150 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 BAK1Q16611 211 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 ST8SIA1Q92185 356 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 TAAR3PQ9P1P4 343 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 CDK5R1Q15078 307 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 TMEM208Q9BTX3 173 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 TOGARAM1Q9Y4F4 1720 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 A0A087WUJ7 227 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 TCTAP57738 103 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 OR1F12Q8NHA8 337 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 RTN4IP1Q8WWV3 396 aaPredicted RBP16.29■□□□□ 0.2
SNX27-202ENST00000368841 HSD17B10Q99714 261 aaKnown RBP16.29■□□□□ 0.2
SNX27-202ENST00000368841 BTAF1O14981 1849 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 VAMP5O95183 116 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 CCR5P51681 352 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 OR1A1Q9P1Q5 309 aa16.29■□□□□ 0.2
SNX27-202ENST00000368841 IGHV5-51A0A0C4DH38 117 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 GABARAPL3Q9BY60 117 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 UCK1Q9HA47 277 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 A0A0A6YYD5 115 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 TSPAN12O95859 305 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 FAM3AP98173 230 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 ZNF788Q6ZQV5 615 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 RPEQ96AT9 228 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 MMP25Q9NPA2 562 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 DHHO43323 396 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 RTP5Q14D33 572 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 PLPP6Q8IY26 295 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 C2orf50Q96LR7 162 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 TMEM272A0A1B0GTI8 110 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 PYCARD-AS1I3L0S3 204 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 USF1P22415 310 aaPredicted RBP16.28■□□□□ 0.2
SNX27-202ENST00000368841 CNN1P51911 297 aaKnown RBP16.28■□□□□ 0.2
SNX27-202ENST00000368841 ZNF117Q03924 483 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 LINC00303Q3SY05 128 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 OR1B1Q8NGR6 318 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 OR2G2Q8NGZ5 317 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 LYZP61626 148 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 FZD5Q13467 585 aa16.28■□□□□ 0.2
SNX27-202ENST00000368841 OR2F1Q13607 317 aa16.27■□□□□ 0.2
SNX27-202ENST00000368841 SPACA9Q96E40 222 aaPredicted RBP16.27■□□□□ 0.2
SNX27-202ENST00000368841 TRAV34A0A0B4J273 112 aa16.27■□□□□ 0.2
SNX27-202ENST00000368841 FUT6P51993 359 aa16.27■□□□□ 0.2
SNX27-202ENST00000368841 HYAL1Q12794 435 aa16.27■□□□□ 0.2
SNX27-202ENST00000368841 TMEM65Q6PI78 240 aa16.27■□□□□ 0.2
SNX27-202ENST00000368841 ARHGAP5-AS1Q96IT6 56 aa16.27■□□□□ 0.2
SNX27-202ENST00000368841 POMT2Q9UKY4 750 aa16.27■□□□□ 0.2
SNX27-202ENST00000368841 UFC1Q9Y3C8 167 aa16.27■□□□□ 0.2
SNX27-202ENST00000368841 MYPOPQ86VE0 399 aaPredicted RBP16.27■□□□□ 0.2
SNX27-202ENST00000368841 GNPNAT1Q96EK6 184 aaPredicted RBP16.27■□□□□ 0.2
SNX27-202ENST00000368841 TRAPPC1Q9Y5R8 145 aa16.27■□□□□ 0.2
SNX27-202ENST00000368841 ORM2P19652 201 aa16.27■□□□□ 0.2
SNX27-202ENST00000368841 SLC37A1P57057 533 aa16.27■□□□□ 0.2
SNX27-202ENST00000368841 OR2D2Q9H210 308 aa16.27■□□□□ 0.2
SNX27-202ENST00000368841 ANKRD33Q7Z3H0 272 aa16.27■□□□□ 0.19
SNX27-202ENST00000368841 WFDC3Q8IUB2 231 aa16.27■□□□□ 0.19
SNX27-202ENST00000368841 MRGPRDQ8TDS7 321 aa16.27■□□□□ 0.19
SNX27-202ENST00000368841 SLC6A13Q9NSD5 602 aa16.27■□□□□ 0.19
SNX27-202ENST00000368841 LSM2Q9Y333 95 aaKnown RBP16.27■□□□□ 0.19
SNX27-202ENST00000368841 OR2M5A3KFT3 312 aa16.27■□□□□ 0.19
SNX27-202ENST00000368841 B4GALNT1Q00973 533 aa16.27■□□□□ 0.19
SNX27-202ENST00000368841 FA2HQ7L5A8 372 aa16.27■□□□□ 0.19
SNX27-202ENST00000368841 C6orf201Q7Z4U5 140 aa16.27■□□□□ 0.19
SNX27-202ENST00000368841 FAM26EQ8N5C1 309 aa16.27■□□□□ 0.19
SNX27-202ENST00000368841 AAMDCQ9H7C9 122 aa16.27■□□□□ 0.19
SNX27-202ENST00000368841 TMEM30CPA0ZSE6 113 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 SFTA3P0C7M3 94 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 TPPP2P59282 170 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 GALNSP34059 522 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 ZNF586Q9NXT0 402 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 DNPH1O43598 174 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 C1QBP02746 253 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 PNLIPRP2P54317 469 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 MICBQ29980 383 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 PTOV1Q86YD1 416 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 OR2A1Q8NGT9 310 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 DDX60LQ5H9U9 1706 aaKnown RBP16.26■□□□□ 0.19
SNX27-202ENST00000368841 TAAR5O14804 337 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 SPP1P10451 314 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 FAM219AQ8IW50 185 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 NTN1O95631 604 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 TIAL1Q01085 375 aaKnown RBP eCLIP16.26■□□□□ 0.19
SNX27-202ENST00000368841 ENDOGQ14249 297 aaKnown RBP16.26■□□□□ 0.19
SNX27-202ENST00000368841 B3GNTL1Q67FW5 361 aaPredicted RBP16.26■□□□□ 0.19
SNX27-202ENST00000368841 PARD6AQ9NPB6 346 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 PCOLCE2Q9UKZ9 415 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 PPIL1Q9Y3C6 166 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms