RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 CD24P25063 80 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 SLC36A3Q495N2 470 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 TBPL2Q6SJ96 375 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 EGFL6Q8IUX8 553 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 OFCC1Q8IZS5 231 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 OR5M8Q8NGP6 311 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 OR13D1Q8NGV5 346 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 TM2D3Q9BRN9 247 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 SLC25A33Q9BSK2 321 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 PAPOLGQ9BWT3 736 aaKnown RBP11.57□□□□□ -0.56
VAMP4-202ENST00000367740 NDEL1Q9GZM8 345 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 FGF23Q9GZV9 251 aaPredicted RBP11.57□□□□□ -0.56
VAMP4-202ENST00000367740 SRA1Q9HD15 236 aaKnown RBP11.57□□□□□ -0.56
VAMP4-202ENST00000367740 SIGLEC7Q9Y286 467 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 RHBDD3Q9Y3P4 386 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 IER3IP1Q9Y5U9 82 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 A0A087WUU8 490 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 SEC14L6B5MCN3 397 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 CCL24O00175 119 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 LY86O95711 162 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 IGHV1-8P0DP01 117 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 DCTDP32321 178 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 RPS27P42677 84 aaKnown RBP11.56□□□□□ -0.56
VAMP4-202ENST00000367740 PRKXP51817 358 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 FXYD6P3P58550 94 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 KMT2AQ03164 3969 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 DYNC1I2Q13409 638 aaKnown RBP11.56□□□□□ -0.56
VAMP4-202ENST00000367740 KLHL12Q53G59 568 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 LHFPL2Q6ZUX7 228 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 MBOAT2Q6ZWT7 520 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 ZNF695Q8IW36 515 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 RNF113BQ8IZP6 322 aaKnown RBP11.56□□□□□ -0.56
VAMP4-202ENST00000367740 MICU1Q9BPX6 476 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 RTL8AQ9BWD3 113 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 YY1AP1Q9H869 796 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 SP140LQ9H930 580 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 ZFP57Q9NU63 452 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 MRPL22Q9NWU5 206 aaKnown RBP11.56□□□□□ -0.56
VAMP4-202ENST00000367740 N6AMT1Q9Y5N5 214 aa11.56□□□□□ -0.56
VAMP4-202ENST00000367740 hCG_38984A0A1B0GV85 526 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 TMEM210A6NLX4 147 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 H3BUI4 141 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 J3KTA2 159 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 FFAR1O14842 300 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 PTP4A3O75365 173 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 OR2F2O95006 317 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 TROVE2P10155 538 aaKnown RBP eCLIP11.55□□□□□ -0.56
VAMP4-202ENST00000367740 PSKH1P11801 424 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 NOS3P29474 1203 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 YAP1P46937 504 aaKnown RBP11.55□□□□□ -0.56
VAMP4-202ENST00000367740 OR3A4PP47883 348 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 TRAM2Q15035 370 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 SEC23BQ15437 767 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 DEFB136Q30KP8 78 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 AGKQ53H12 422 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 C9orf152Q5JTZ5 239 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 MINOS1Q5TGZ0 78 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 EPGNQ6UW88 154 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 ZNF730Q6ZMV8 503 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 THAP5Q7Z6K1 395 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 CALHM1Q8IU99 346 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 CAPSLQ8WWF8 208 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 LYVE1Q9Y5Y7 322 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 MINOS1-NBL1R4GNA1 71 aa11.55□□□□□ -0.56
VAMP4-202ENST00000367740 ANXA2P2A6NMY6 339 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 HLA-DQA2P01906 255 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 HCKP08631 526 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 SLC7A2P52569 658 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 FAM76BQ5HYJ3 339 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 LCN8Q6JVE9 175 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 PLBD1Q6P4A8 553 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 ZBTB46Q86UZ6 589 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 ZDHHC21Q8IVQ6 265 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 CD177Q8N6Q3 437 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 OR2T27Q8NH04 317 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 NDNFQ8TB73 568 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 REEP6Q96HR9 211 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 FAM46AQ96IP4 442 aaKnown RBP11.54□□□□□ -0.56
VAMP4-202ENST00000367740 RBM14Q96PK6 669 aaKnown RBP11.54□□□□□ -0.56
VAMP4-202ENST00000367740 NMNAT3Q96T66 252 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 COPS4Q9BT78 406 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 TMEM109Q9BVC6 243 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 RPRD1BQ9NQG5 326 aaKnown RBP11.54□□□□□ -0.56
VAMP4-202ENST00000367740 TBC1D23Q9NUY8 699 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 SNX13Q9Y5W8 968 aa11.54□□□□□ -0.56
VAMP4-202ENST00000367740 DNAH10Q8IVF4 4471 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 TBX1O43435 398 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 MTRF1O75570 445 aaKnown RBP11.53□□□□□ -0.56
VAMP4-202ENST00000367740 PIPP12273 146 aaPredicted RBP11.53□□□□□ -0.56
VAMP4-202ENST00000367740 IFNA8P32881 189 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 GSK3AP49840 483 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 RPS6KA3P51812 740 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 ZNF260Q3ZCT1 412 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 DPY19L2P2Q6ZN68 376 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 OR4Q3Q8NH05 313 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 HPSE2Q8WWQ2 592 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.53□□□□□ -0.56
VAMP4-202ENST00000367740 OR5P3Q8WZ94 311 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 LZICQ8WZA0 190 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 SGK3Q96BR1 496 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms