RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.48□□□□□ -0.89
H3F3A-202ENST00000366814 SKA3Q8IX90 412 aa9.48□□□□□ -0.89
H3F3A-202ENST00000366814 GALNT11Q8NCW6 608 aa9.48□□□□□ -0.89
H3F3A-202ENST00000366814 STEAP2Q8NFT2 490 aa9.48□□□□□ -0.89
H3F3A-202ENST00000366814 SPSB1Q96BD6 273 aa9.48□□□□□ -0.89
H3F3A-202ENST00000366814 SGK3Q96BR1 496 aa9.48□□□□□ -0.89
H3F3A-202ENST00000366814 SNRNP40Q96DI7 357 aaKnown RBP9.48□□□□□ -0.89
H3F3A-202ENST00000366814 DEFB127Q9H1M4 99 aa9.48□□□□□ -0.89
H3F3A-202ENST00000366814 BEX1Q9HBH7 125 aa9.48□□□□□ -0.89
H3F3A-202ENST00000366814 SLC7A10Q9NS82 523 aa9.48□□□□□ -0.89
H3F3A-202ENST00000366814 CSAG2Q9Y5P2 127 aa9.48□□□□□ -0.89
H3F3A-202ENST00000366814 SVILO95425 2214 aa9.48□□□□□ -0.89
H3F3A-202ENST00000366814 TENM4Q6N022 2769 aa9.48□□□□□ -0.89
H3F3A-202ENST00000366814 E9PLN8 166 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 CDC14BO60729 498 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 IGHV3-9P01782 118 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 RLN1P04808 185 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 MELTFP08582 738 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 CPN1P15169 458 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 PTGFRP43088 359 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 ALDH3B1P43353 468 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 MECP2P51608 486 aaKnown RBP9.47□□□□□ -0.89
H3F3A-202ENST00000366814 GNG2P59768 71 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 ZNF169Q14929 603 aaPredicted RBP9.47□□□□□ -0.89
H3F3A-202ENST00000366814 CDK10Q15131 360 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 ZMYND11Q15326 602 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 SFRP5Q5T4F7 317 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 TRAPPC6BQ86SZ2 158 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 BEST4Q8NFU0 473 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 OR51S1Q8NGJ8 323 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 CCDC107Q8WV48 283 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 RNF170Q96K19 258 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 TECTBQ96PL2 329 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 SLC25A21Q9BQT8 299 aaPredicted RBP9.47□□□□□ -0.89
H3F3A-202ENST00000366814 WNT5BQ9H1J7 359 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 ZMAT3Q9HA38 289 aaKnown RBP9.47□□□□□ -0.89
H3F3A-202ENST00000366814 GP6Q9HCN6 339 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 ZNF69Q9UC07 566 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 FLVCR2Q9UPI3 526 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 PLEKHA6Q9Y2H5 1048 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 IGKV1-9A0A0C4DH69 117 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 AMY2AP04746 511 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 SULT1A3P0DMM9 295 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 SULT1A4P0DMN0 295 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 TBPP20226 339 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 GNLYP22749 145 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 ARR3P36575 388 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 ARF1P84077 181 aaKnown RBP9.47□□□□□ -0.89
H3F3A-202ENST00000366814 PNLIPRP3Q17RR3 467 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 KRTAP27-1Q3LI81 207 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 SLC22A6Q4U2R8 563 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 RNASE10Q5GAN6 216 aaKnown RBP9.47□□□□□ -0.89
H3F3A-202ENST00000366814 PABPC1L2AQ5JQF8 200 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 TMEM53Q6P2H8 277 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 NCCRP1Q6ZVX7 275 aaPredicted RBP9.47□□□□□ -0.89
H3F3A-202ENST00000366814 DPPA2Q7Z7J5 298 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 FJX1Q86VR8 437 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 OR11H7Q8NGC8 314 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 SSC4DQ8WTU2 575 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 NPRL2Q8WTW4 380 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 TNFAIP8L1Q8WVP5 186 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 RAB3CQ96E17 227 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 PRRT1Q99946 306 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 SELENOIQ9C0D9 397 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 LPAR5Q9H1C0 372 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 ZDHHC11Q9H8X9 412 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 ASF1BQ9NVP2 202 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 ZNF175Q9Y473 711 aa9.47□□□□□ -0.89
H3F3A-202ENST00000366814 PRRC2CQ9Y520 2896 aaKnown RBP9.46□□□□□ -0.89
H3F3A-202ENST00000366814 SLC22A20A6NK97 555 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 RGS13O14921 159 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 ATP6V1G1O75348 118 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 MMP7P09237 267 aaPredicted RBP9.46□□□□□ -0.9
H3F3A-202ENST00000366814 PATE4P0C8F1 98 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 COX5BP10606 129 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 ANOS1P23352 680 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 CBX5P45973 191 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 TNK1Q13470 666 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 UBE2V2Q15819 145 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 NDUFA5Q16718 116 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 CLVS2Q5SYC1 327 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 RTL6Q6ICC9 239 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 LHFPL2Q6ZUX7 228 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 BPIFB2Q8N4F0 458 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 OR51T1Q8NGJ9 327 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 OR2AE1Q8NHA4 323 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 ZFAND1Q8TCF1 268 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 DVL3Q92997 716 aaPredicted RBP9.46□□□□□ -0.9
H3F3A-202ENST00000366814 PRDM14Q9GZV8 571 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 SLA2Q9H6Q3 261 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 ZNF224Q9NZL3 707 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 SLC7A11Q9UPY5 501 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 LIPGQ9Y5X9 500 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 ZGRF1Q86YA3 2104 aa9.46□□□□□ -0.9
H3F3A-202ENST00000366814 MEIKINA0A087WXM9 373 aa9.45□□□□□ -0.9
H3F3A-202ENST00000366814 TRAV17A0A0B4J275 112 aa9.45□□□□□ -0.9
H3F3A-202ENST00000366814 C5orf63A6NC05 138 aa9.45□□□□□ -0.9
H3F3A-202ENST00000366814 FABP7O15540 132 aa9.45□□□□□ -0.9
H3F3A-202ENST00000366814 CD74P04233 296 aa9.45□□□□□ -0.9
H3F3A-202ENST00000366814 GNB3P16520 340 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms