RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 Q6ZSR6 202 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 ERO1BQ86YB8 467 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 CA13Q8N1Q1 262 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 NDNFQ8TB73 568 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 LRRC20Q8TCA0 184 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 GLT1D1Q96MS3 346 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 RHOXF2Q9BQY4 288 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 CHCHD7Q9BUK0 85 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 RAB1BQ9H0U4 201 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 C6orf50Q9HD87 102 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 VCX3AQ9NNX9 186 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZNF302Q9NR11 478 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 TFR2Q9UP52 801 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 ACOT9Q9Y305 439 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 PLA2R1Q13018 1463 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 SIGLEC1Q9BZZ2 1709 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 IGHV3-49A0A0A0MS15 119 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 TMEM150BA6NC51 233 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZNF879B4DU55 563 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 J3QT63 122 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 CCDC22O60826 627 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 GATBO75879 557 aaKnown RBP2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 HLA-DQB1P01920 261 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 APOA1P02647 267 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 MMP7P09237 267 aaPredicted RBP2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 P2RY2P41231 377 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 DYNC1I2Q13409 638 aaKnown RBP2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 EIF4EBP2Q13542 120 aaPredicted RBP2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 COX19Q49B96 90 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 FAM222AQ5U5X8 452 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 TRIML2Q8N7C3 387 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 SPANXA2-OT1Q8N9U9 137 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 SPERTQ8NA61 448 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 OR5T1Q8NG75 326 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 OR9A2Q8NGT5 310 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 LGALS14Q8TCE9 139 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 SFXN5Q8TD22 340 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 MRPL48Q96GC5 212 aaKnown RBP2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 SNF8Q96H20 258 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 OR10C1Q96KK4 312 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 CFAP53Q96M91 514 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 Q96MT0 163 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 ALS2CR12Q96Q35 445 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 C20orf144Q9BQM9 153 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 UTP23Q9BRU9 249 aaKnown RBP2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 TIMM29Q9BSF4 260 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 NUDT9Q9BW91 350 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 CSNK1G1Q9HCP0 422 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 CYTL1Q9NRR1 136 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 AGPAT3Q9NRZ7 376 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 TMEM100Q9NV29 134 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 VAPAQ9P0L0 249 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 SLC7A11Q9UPY5 501 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 FARSAQ9Y285 508 aaKnown RBP2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 RBMX2Q9Y388 322 aaKnown RBP2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 CBY1Q9Y3M2 126 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 LRRC42Q9Y546 428 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 MYO10Q9HD67 2058 aa2.19□□□□□ -2.06
RNU6-28P-201ENST00000362378 TRAV8-7A0A075B6U6 113 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 IGHV6-1A0A0B4J1U7 121 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 TRAV8-6A0A0B4J262 113 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 IGKV6-21A0A0C4DH24 114 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 TVP23AA6NH52 213 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZNF850A8MQ14 1090 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 K7EN84 100 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 M0R1B8 84 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZNF593O00488 134 aaPredicted RBP2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 SC5DO75845 299 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 HSPD1P10809 573 aaKnown RBP2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 CCL2P13500 99 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 PAX6P26367 422 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 DEKP35659 375 aaKnown RBP2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 GPR4P46093 362 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 MOBPQ13875 183 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 MAD2L1BPQ15013 274 aaPredicted RBP2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 TOMM34Q15785 309 aaPredicted RBP2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 HHATQ5VTY9 493 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZNF880Q6PDB4 577 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 SETD3Q86TU7 594 aaPredicted RBP2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZCCHC24Q8N2G6 241 aaKnown RBP2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 OR6K2Q8NGY2 324 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 ING5Q8WYH8 240 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 CDKL2Q92772 493 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 TMIGD2Q96BF3 282 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 S100PBPQ96BU1 408 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 CDX2Q99626 313 aaPredicted RBP2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 HINT2Q9BX68 163 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 ULBP2Q9BZM5 246 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 C21orf62Q9NYP8 219 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZNF229Q9UJW7 825 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 PPIL1Q9Y3C6 166 aa2.18□□□□□ -2.06
RNU6-28P-201ENST00000362378 FAM240AA0A1B0GVK7 77 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 C7orf66A4D0T2 115 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 CENPBD1B2RD01 187 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 CYB5R3P00387 301 aaPredicted RBP2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 LIPCP11150 499 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 PRKACBP22694 351 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 IL3RAP26951 378 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 PSMB5P28074 263 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 PRSS3P35030 304 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms