RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 NKX2-4Q9H2Z4 354 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 ADAM10O14672 748 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 CD1AP06126 327 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 MMP9P14780 707 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 HHEXQ03014 270 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 PNLIPRP3Q17RR3 467 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 ZNF684Q5T5D7 378 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 SLC25A24Q6NUK1 477 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 MRPL41Q8IXM3 137 aaKnown RBP11.28□□□□□ -0.6
VAMP1-201ENST00000361716 SLC37A2Q8TED4 501 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 TAAR8Q969N4 342 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 ABHD14AQ9BUJ0 271 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 PLA2G2FQ9BZM2 168 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 SLC26A1Q9H2B4 701 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 LRP12Q9Y561 859 aa11.28□□□□□ -0.6
VAMP1-201ENST00000361716 ARPC3O15145 178 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 SCGB1D1O95968 90 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 ADH1BP00325 375 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 CCL20P78556 96 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 NHLH2Q02577 135 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 KIR2DS3Q14952 304 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 TSPO2Q5TGU0 170 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 ASPHD2Q6ICH7 369 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 NPSR1Q6W5P4 371 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 HIST3H2BBQ8N257 126 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 TMEM217Q8N7C4 229 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 KDF1Q8NAX2 398 aaPredicted RBP11.27□□□□□ -0.6
VAMP1-201ENST00000361716 OTOSQ8NHW6 89 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 RLN3Q8WXF3 142 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 NIPSNAP3BQ9BS92 247 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 DDA1Q9BW61 102 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 VSX1Q9NZR4 365 aaPredicted RBP11.27□□□□□ -0.6
VAMP1-201ENST00000361716 HDGFL3Q9Y3E1 203 aa11.27□□□□□ -0.6
VAMP1-201ENST00000361716 EPOPA6NHQ4 379 aa11.27□□□□□ -0.61
VAMP1-201ENST00000361716 ZNF708P17019 499 aa11.27□□□□□ -0.61
VAMP1-201ENST00000361716 GABRA4P48169 554 aa11.27□□□□□ -0.61
VAMP1-201ENST00000361716 ACKR1Q16570 336 aa11.27□□□□□ -0.61
VAMP1-201ENST00000361716 ZNF260Q3ZCT1 412 aa11.27□□□□□ -0.61
VAMP1-201ENST00000361716 RNF144BQ7Z419 303 aa11.27□□□□□ -0.61
VAMP1-201ENST00000361716 FAM160A2Q8N612 972 aaPredicted RBP11.27□□□□□ -0.61
VAMP1-201ENST00000361716 DTD1Q8TEA8 209 aa11.27□□□□□ -0.61
VAMP1-201ENST00000361716 ZNF764Q96H86 408 aaPredicted RBP11.27□□□□□ -0.61
VAMP1-201ENST00000361716 OR5B2Q96R09 309 aa11.27□□□□□ -0.61
VAMP1-201ENST00000361716 OR8B4Q96RC9 309 aa11.27□□□□□ -0.61
VAMP1-201ENST00000361716 STACQ99469 402 aa11.27□□□□□ -0.61
VAMP1-201ENST00000361716 ABHD6Q9BV23 337 aa11.27□□□□□ -0.61
VAMP1-201ENST00000361716 NXF5Q9H1B4 397 aaKnown RBP11.27□□□□□ -0.61
VAMP1-201ENST00000361716 RAB18Q9NP72 206 aa11.27□□□□□ -0.61
VAMP1-201ENST00000361716 COL4A3Q01955 1670 aa11.27□□□□□ -0.61
VAMP1-201ENST00000361716 H0YIG0 161 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 TAAR5O14804 337 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 LINC01565O15544 149 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 H2BFMP0C1H6 154 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 LINC00271P0C7V0 271 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 ZNF20P17024 532 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 RAB1AP62820 205 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 C1orf53Q5VUE5 145 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 GLIPR1L1Q6UWM5 242 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 OR2G3Q8NGZ4 309 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 MRPL24Q96A35 216 aaKnown RBP11.26□□□□□ -0.61
VAMP1-201ENST00000361716 SCARF2Q96GP6 870 aaPredicted RBP11.26□□□□□ -0.61
VAMP1-201ENST00000361716 FAM210BQ96KR6 192 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 MRPL37Q9BZE1 423 aaKnown RBP11.26□□□□□ -0.61
VAMP1-201ENST00000361716 NMNAT2Q9BZQ4 307 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 SYT7O43581 403 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 SLC35E2P0CK97 266 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 SFTPCP11686 197 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 RAB11AP62491 216 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 OPN5Q6U736 354 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 MEX3BQ6ZN04 569 aaKnown RBP11.26□□□□□ -0.61
VAMP1-201ENST00000361716 DCXRQ7Z4W1 244 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 CYB561D1Q8N8Q1 229 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 PLPP5Q8NEB5 264 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 TMEM230Q96A57 120 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 ANKRD9Q96BM1 317 aaPredicted RBP11.26□□□□□ -0.61
VAMP1-201ENST00000361716 MED29Q9NX70 200 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 LOC390937A0A1W2PQ73 354 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 FAM221AA4D161 298 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 SHISA8B8ZZ34 492 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 CYR61O00622 381 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 ZNF264O43296 627 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 NKX2-2O95096 273 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 FGF7P21781 194 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 SNU13P55769 128 aaKnown RBP11.26□□□□□ -0.61
VAMP1-201ENST00000361716 ZNF74Q16587 644 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 WBP2NLQ6ICG8 309 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 KLHL24Q6TFL4 600 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 THNSL2Q86YJ6 484 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 GNRHR2Q96P88 292 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 LMAN1LQ9HAT1 526 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 OR52A1Q9UKL2 312 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 SLC17A4Q9Y2C5 497 aa11.26□□□□□ -0.61
VAMP1-201ENST00000361716 IGHV3-20A0A0C4DH32 117 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 MEGF11A6BM72 1044 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 ZNF705FA8MVS1 300 aaPredicted RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 PTBP3O95758 552 aaKnown RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 ZNF705DP0CH99 300 aaPredicted RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 ZNF705BP0CI00 300 aaPredicted RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 PGA3P0DJD8 388 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 VSIG8P0DPA2 414 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms