RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 KRBOX1C9JBD0 128 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 FAM157AC9JC47 383 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 C3orf80F5H4A9 247 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 ARNTP27540 789 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 AMTP48728 403 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 PIGPP57054 158 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 NUP37Q8NFH4 326 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 OR2G2Q8NGZ5 317 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 SF3B5Q9BWJ5 86 aaKnown RBP9.8□□□□□ -0.84
CLIP1-203ENST00000361654 V9GYS6 101 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 ADAMTSL3P82987 1691 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 KRASP01116 189 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 FTH1P19P0C7X4 201 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 CDK5R1Q15078 307 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 LCN15Q6UWW0 184 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 LYSMD2Q8IV50 215 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 KCNE1BA0A087WTH5 132 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 OR2W5A6NFC9 320 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 C5orf67F2Z3F1 127 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 LIMS3P0CW19 117 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 LIMS4P0CW20 117 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 CEACAM6P40199 344 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 PGFP49763 221 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 TCTN1Q2MV58 587 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 RHOUQ7L0Q8 258 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 GPR32P1Q8NGA4 272 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 OR4D10Q8NGI6 311 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 PTP4A1Q93096 173 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 PTDSS2Q9BVG9 487 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 NTMQ9P121 344 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 RNF7Q9UBF6 113 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 LPAR3Q9UBY5 353 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 CLN8Q9UBY8 286 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 B4E171 279 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 SHISA8B8ZZ34 492 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 KLK8O60259 260 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 FCGR3BO75015 233 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 FGF7P21781 194 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 TSPAN7P41732 249 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 SLC35B1P78383 322 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 NRARPQ7Z6K4 114 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 ARSGQ96EG1 525 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 C4orf45Q96LM5 186 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 CLEC2DQ9UHP7 191 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 PSG11Q9UQ72 335 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 A0A1W2PRD5 423 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 A0A1W2PRF3 423 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 A0A1W2PRM7 423 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 ZC3H12DA2A288 527 aaKnown RBP9.79□□□□□ -0.84
CLIP1-203ENST00000361654 ARRDC5A6NEK1 342 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 K7ESF4 209 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 OIP5O43482 229 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 CCL4P13236 92 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 SSBP1Q04837 148 aaKnown RBP9.79□□□□□ -0.84
CLIP1-203ENST00000361654 ZNF658BQ4V348 819 aaPredicted RBP9.79□□□□□ -0.84
CLIP1-203ENST00000361654 PRR27Q6MZM9 219 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 DLEU7Q6UYE1 221 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 UBE3DQ7Z6J8 389 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 MUC20Q8N307 709 aaPredicted RBP9.79□□□□□ -0.84
CLIP1-203ENST00000361654 PXT1Q8NFP0 134 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 OR4S1Q8NGB4 309 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 GABARAPL1Q9H0R8 117 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 RBM38Q9H0Z9 239 aaKnown RBP9.79□□□□□ -0.84
CLIP1-203ENST00000361654 PRDM7Q9NQW5 492 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 KPTNQ9Y664 436 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 SLC25A4P12235 298 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 CCR6P51684 374 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 P2RX3P56373 397 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 ISXQ2M1V0 245 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 DCAF10Q5QP82 559 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 DOLPP1Q86YN1 238 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 SLC25A40Q8TBP6 338 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 NUDCD2Q8WVJ2 157 aa9.79□□□□□ -0.84
CLIP1-203ENST00000361654 BRWD1Q9NSI6 2320 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 LAMB4A4D0S4 1761 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 HMX2A2RU54 273 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 NAT1P18440 290 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 HOXC8P31273 242 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 C1orf185Q5T7R7 199 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 FUNDC1Q8IVP5 155 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 OR1L1Q8NH94 360 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 OR8B4Q96RC9 309 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 TMPRSS2O15393 492 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 ALX3O95076 343 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 JUNBP17275 347 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-203ENST00000361654 PAX5Q02548 391 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 Q1RN00 199 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 OTOSQ8NHW6 89 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 ADGRG7Q96K78 797 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 DOK1Q99704 481 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 C12orf10Q9HB07 376 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 MMP25Q9NPA2 562 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 FSCN3Q9NQT6 498 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 RGPD5Q99666 1765 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 TRBV23-1A0A0A0MS06 115 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 POM121CA8CG34 1229 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 ZNF727A8MUV8 499 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 FABP7O15540 132 aa9.78□□□□□ -0.84
CLIP1-203ENST00000361654 DHRS3O75911 302 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms