RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 C17orf78Q8N4C9 275 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 FLRT3Q9NZU0 649 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 SERPINE3A8MV23 424 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 K7EQM0 130 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 NGFP01138 241 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 FCARP24071 287 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 SOHLH1Q5JUK2 328 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 NAA40Q86UY6 237 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 OR8U1Q8NH10 309 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 LRRC29Q8WV35 223 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 C4orf45Q96LM5 186 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 ADGRL4Q9HBW9 690 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 MN1Q10571 1320 aaPredicted RBP16.54■□□□□ 0.24
CLIP2-202ENST00000361545 EIF4EBP2Q13542 120 aaPredicted RBP16.54■□□□□ 0.24
CLIP2-202ENST00000361545 Q8IYB0 196 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 SCN4AP35499 1836 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 TXNL1O43396 289 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 CD3EP07766 207 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 FAM122CQ6P4D5 195 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 TMUB2Q71RG4 321 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 MFSD4AQ8N468 514 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 OR10P1Q8NGE3 313 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 HSBP1L1C9JCN9 74 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 ACKR3P25106 362 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 BHLHA15Q7RTS1 189 aaPredicted RBP16.53■□□□□ 0.24
CLIP2-202ENST00000361545 C12orf10Q9HB07 376 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 ABHD3Q8WU67 409 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 BSCL2Q96G97 398 aaPredicted RBP16.53■□□□□ 0.24
CLIP2-202ENST00000361545 MTCH1Q9NZJ7 389 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 XRCC3O43542 346 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 ICMTO60725 284 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 FUCA1P04066 466 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 WNT1P04628 370 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 SELENOPP49908 381 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 MCCD1P59942 119 aaPredicted RBP16.53■□□□□ 0.24
CLIP2-202ENST00000361545 PLA1AQ53H76 456 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 STUMQ69YW2 141 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 C9orf40Q8IXQ3 194 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 FAM58AQ8N1B3 248 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 SVBPQ8N300 66 aa16.53■□□□□ 0.24
CLIP2-202ENST00000361545 A0A1W2PQD3 144 aa16.52■□□□□ 0.24
CLIP2-202ENST00000361545 M0R1X1 148 aa16.52■□□□□ 0.24
CLIP2-202ENST00000361545 OR4E1P0C645 316 aa16.52■□□□□ 0.24
CLIP2-202ENST00000361545 FAM74A1Q5RGS3 127 aa16.52■□□□□ 0.24
CLIP2-202ENST00000361545 OR6X1Q8NH79 312 aa16.52■□□□□ 0.24
CLIP2-202ENST00000361545 UNC13CQ8NB66 2214 aa16.52■□□□□ 0.24
CLIP2-202ENST00000361545 LIPT2A6NK58 231 aa16.52■□□□□ 0.24
CLIP2-202ENST00000361545 STARD6P59095 220 aa16.52■□□□□ 0.24
CLIP2-202ENST00000361545 OR4C16Q8NGL9 310 aa16.52■□□□□ 0.24
CLIP2-202ENST00000361545 ZNF501Q96CX3 271 aaPredicted RBP16.52■□□□□ 0.24
CLIP2-202ENST00000361545 PTHLHP12272 177 aa16.52■□□□□ 0.24
CLIP2-202ENST00000361545 WDR54Q9H977 334 aa16.52■□□□□ 0.24
CLIP2-202ENST00000361545 ACTL6AO96019 429 aa16.52■□□□□ 0.23
CLIP2-202ENST00000361545 FGF11Q92914 225 aa16.52■□□□□ 0.23
CLIP2-202ENST00000361545 LIN37Q96GY3 246 aaPredicted RBP16.52■□□□□ 0.23
CLIP2-202ENST00000361545 NMES1Q9C002 83 aa16.52■□□□□ 0.23
CLIP2-202ENST00000361545 AGFG2O95081 481 aa16.52■□□□□ 0.23
CLIP2-202ENST00000361545 DTYMKP23919 212 aa16.52■□□□□ 0.23
CLIP2-202ENST00000361545 SLC25A45Q8N413 288 aa16.52■□□□□ 0.23
CLIP2-202ENST00000361545 PXT1Q8NFP0 134 aa16.52■□□□□ 0.23
CLIP2-202ENST00000361545 OR2M7Q8NG81 312 aa16.52■□□□□ 0.23
CLIP2-202ENST00000361545 OR8D4Q8NGM9 314 aa16.52■□□□□ 0.23
CLIP2-202ENST00000361545 TAAR6Q96RI8 345 aa16.52■□□□□ 0.23
CLIP2-202ENST00000361545 UCN2Q96RP3 112 aa16.52■□□□□ 0.23
CLIP2-202ENST00000361545 TREM2Q9NZC2 230 aa16.52■□□□□ 0.23
CLIP2-202ENST00000361545 ZNF230Q9UIE0 474 aaPredicted RBP16.52■□□□□ 0.23
CLIP2-202ENST00000361545 DTX4Q9Y2E6 619 aa16.52■□□□□ 0.23
CLIP2-202ENST00000361545 MRPS18BQ9Y676 258 aaKnown RBP16.52■□□□□ 0.23
CLIP2-202ENST00000361545 ADIRFQ15847 76 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 ATG4DQ86TL0 474 aaPredicted RBP16.51■□□□□ 0.23
CLIP2-202ENST00000361545 KCNRGQ8N5I3 272 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 ASB10Q8WXI3 467 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 CHST6Q9GZX3 395 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 AQP7P3A6NL99 342 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 DVL1O14640 695 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 DVL1P1P54792 670 aaPredicted RBP16.51■□□□□ 0.23
CLIP2-202ENST00000361545 GLCCI1Q86VQ1 547 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 PNLIPP16233 465 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 PTGFRP43088 359 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 LYPD8Q6UX82 237 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 TMEM104Q8NE00 496 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 ARHGAP5-AS1Q96IT6 56 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 STRAPQ9Y3F4 350 aaKnown RBP16.51■□□□□ 0.23
CLIP2-202ENST00000361545 GREM1O60565 184 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 COX7A1P24310 79 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 F2RP25116 425 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 HMGA2P52926 109 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 ZFP62Q8NB50 900 aaPredicted RBP16.51■□□□□ 0.23
CLIP2-202ENST00000361545 TMEM230Q96A57 120 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 SCN3AQ9NY46 2000 aa16.51■□□□□ 0.23
CLIP2-202ENST00000361545 DLEC1Q9Y238 1755 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 A0A0A6YYJ9 748 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 SP9P0CG40 484 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 C21orf58P58505 322 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 YIPF5Q969M3 257 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 GLRX2Q9NS18 164 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 GABRB1P18505 474 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 PNLIPRP3Q17RR3 467 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 ADGRG3Q86Y34 549 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 CLDN23Q96B33 292 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms