RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 HMSDA8MTL9 139 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 PLPP3O14495 311 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 SEMG1P04279 462 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 FUT6P51993 359 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 CCL7P80098 99 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 ZNF770Q6IQ21 691 aaPredicted RBP12.25□□□□□ -0.45
VCP-201ENST00000358901 ADGRG3Q86Y34 549 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 ZNF485Q8NCK3 441 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 DEFB108BQ8NET1 73 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 OR1F12Q8NHA8 337 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 EXTL1Q92935 676 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 KCNIP2Q9NS61 270 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 FAM96BQ9Y3D0 163 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 LTBP4Q8N2S1 1624 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 TCRBV16S1A1N1A0A5B0 115 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 CYR61O00622 381 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 ADAM10O14672 748 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 DUS4LO95620 317 aaKnown RBP12.25□□□□□ -0.45
VCP-201ENST00000358901 CST4P01036 141 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 WIPI1Q5MNZ9 446 aaPredicted RBP12.25□□□□□ -0.45
VCP-201ENST00000358901 CATSPERDQ86XM0 798 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 OR4F5Q8NH21 305 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 H1FXQ92522 213 aaKnown RBP12.25□□□□□ -0.45
VCP-201ENST00000358901 OR4F4Q96R69 305 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 SMIM7Q9BQ49 75 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 TMPRSS13Q9BYE2 586 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 RCL1Q9Y2P8 373 aaKnown RBP12.25□□□□□ -0.45
VCP-201ENST00000358901 PIKFYVEQ9Y2I7 2098 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 MOSPD3O75425 235 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 RRASP10301 218 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 CPN1P15169 458 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 PMP22Q01453 160 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 LGALSLQ3ZCW2 172 aaPredicted RBP12.24□□□□□ -0.45
VCP-201ENST00000358901 MIDNQ504T8 468 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 IL34Q6ZMJ4 242 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 ATG4DQ86TL0 474 aaPredicted RBP12.24□□□□□ -0.45
VCP-201ENST00000358901 FAM185AQ8N0U4 392 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 FAAP24Q9BTP7 215 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 MRPS18AQ9NVS2 196 aaKnown RBP12.24□□□□□ -0.45
VCP-201ENST00000358901 MRPL22Q9NWU5 206 aaKnown RBP12.24□□□□□ -0.45
VCP-201ENST00000358901 OPN4Q9UHM6 478 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 GSTZ1O43708 216 aaPredicted RBP12.24□□□□□ -0.45
VCP-201ENST00000358901 S100A8P05109 93 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 GABRA1P14867 456 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 ARR3P36575 388 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 OR3A4PP47883 348 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 PRSS12P56730 875 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 GUK1Q16774 197 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 LAIR2Q6ISS4 152 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 ZNF705AQ6ZN79 300 aaPredicted RBP12.24□□□□□ -0.45
VCP-201ENST00000358901 OR2V1Q8NHB1 315 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 KCNE4Q8WWG9 221 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 MCHR2Q969V1 340 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 TVP23CQ96ET8 276 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 SCMH1Q96GD3 660 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 NXF2Q9GZY0 626 aaKnown RBP12.24□□□□□ -0.45
VCP-201ENST00000358901 RAB18Q9NP72 206 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.24□□□□□ -0.45
VCP-201ENST00000358901 C4orf47A7E2U8 309 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 LEUTXA8MZ59 168 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 CTDSPLO15194 276 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 HOXC4P09017 264 aaPredicted RBP12.24□□□□□ -0.45
VCP-201ENST00000358901 SFTA3P0C7M3 94 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 RAB1AP62820 205 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 UQCC3Q6UW78 93 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 Q7L0L9 218 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 TDHQ8IZJ6 230 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 TMEM52Q8NDY8 209 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 LURAP1Q96LR2 239 aa12.24□□□□□ -0.45
VCP-201ENST00000358901 BTBD17A6NE02 478 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 FIGNL2A6NMB9 653 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 SFT2D2O95562 160 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 THBS3P49746 956 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 FABP6P51161 128 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 DSCR4P56555 118 aaPredicted RBP12.23□□□□□ -0.45
VCP-201ENST00000358901 SPATA46Q5T0L3 261 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 CXorf58Q96LI9 332 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 WFDC6Q9BQY6 131 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 RIMS4Q9H426 269 aaPredicted RBP12.23□□□□□ -0.45
VCP-201ENST00000358901 PSENENQ9NZ42 101 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 GABRA4P48169 554 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 SMAD4Q13485 552 aaKnown RBP12.23□□□□□ -0.45
VCP-201ENST00000358901 DRAM2Q6UX65 266 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 OR8U1Q8NH10 309 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 LSM2Q9Y333 95 aaKnown RBP12.23□□□□□ -0.45
VCP-201ENST00000358901 NDUFB7P17568 137 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 ADPRHL1Q8NDY3 354 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 GABRG3Q99928 467 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 LIN7CQ9NUP9 197 aaKnown RBP12.23□□□□□ -0.45
VCP-201ENST00000358901 CES1P1Q9UKY3 287 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 KLF13Q9Y2Y9 288 aaPredicted RBP12.23□□□□□ -0.45
VCP-201ENST00000358901 AKAP6Q13023 2319 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 MED19A0JLT2 244 aaPredicted RBP12.23□□□□□ -0.45
VCP-201ENST00000358901 F6UZH7 168 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 DHRS3O75911 302 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 GUSBP11Q6P575 273 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 LYPD8Q6UX82 237 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 LINC00052Q96N35 136 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 CHST6Q9GZX3 395 aa12.23□□□□□ -0.45
VCP-201ENST00000358901 MMP24Q9Y5R2 645 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms