RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 KCNRGQ8N5I3 272 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 EIF4E3Q8N5X7 224 aaKnown RBP12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 MITD1Q8WV92 249 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 NABP1Q96AH0 204 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 INTS12Q96CB8 462 aaKnown RBP12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 CMBLQ96DG6 245 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 SRXN1Q9BYN0 137 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 SLC25A32Q9H2D1 315 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 MRPS28Q9Y2Q9 187 aaKnown RBP12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 NOP16Q9Y3C1 178 aaKnown RBP12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 A0A0G2JMM0 328 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 A0A1W2PPB8 328 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 A0A1W2PRS3 328 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 KIR3DP1A8MWS1 328 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 DHHO43323 396 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 DNPH1O43598 174 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 FAM87AP0C7U9 286 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 HIST1H3AP68431 136 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 GFOD2Q3B7J2 385 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 HIST2H3PS2Q5TEC6 136 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 ALKAL2Q6UX46 152 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 HIST2H3AQ71DI3 136 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 OVCH2Q7RTZ1 564 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 RNF144BQ7Z419 303 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 HSD17B13Q7Z5P4 300 aaPredicted RBP12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 ZIC4Q8N9L1 334 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 GJC3Q8NFK1 279 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 OR4S1Q8NGB4 309 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 OR14K1Q8NGZ2 314 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 COQ8AQ8NI60 647 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 PGAM5Q96HS1 289 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 PHB2Q99623 299 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 P4HTMQ9NXG6 502 aa12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 FOXD3Q9UJU5 478 aaPredicted RBP12.52□□□□□ -0.41
NIPAL3-203ENST00000358028 TLN1Q9Y490 2541 aaKnown RBP12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 C9orf170A2RU37 121 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 OR5H15A6NDH6 313 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 A8MXK9 166 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 IFNA6P05013 189 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 POU3F2P20265 443 aaPredicted RBP12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 CD96P40200 585 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 CBX5P45973 191 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 NKPD1Q17RQ9 610 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 C11orf87Q6NUJ2 197 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 H3F3CQ6NXT2 135 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 GLIPR1L1Q6UWM5 242 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 C20orf196Q8IYI0 205 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 ZNF101Q8IZC7 436 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 CCDC54Q8NEL0 328 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 SPACA5Q96QH8 159 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 SF3B5Q9BWJ5 86 aaKnown RBP12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 ULBP2Q9BZM5 246 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 LPAR5Q9H1C0 372 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 GHRLQ9UBU3 117 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 TNFSF18Q9UNG2 199 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 E9PLN8 166 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 SMAD9O15198 467 aaKnown RBP12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 SSX5O60225 188 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 IGLV3-1P01715 115 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 HCKP08631 526 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 NUP62P37198 522 aaPredicted RBP12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 OR3A4PP47883 348 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 ZNF84P51523 738 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 VAX1Q5SQQ9 334 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 YRDCQ86U90 279 aaKnown RBP12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 NAA40Q86UY6 237 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 CD163Q86VB7 1156 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 ZNF843Q8N446 348 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 OR56B1Q8NGI3 324 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 OR14L1PQ8NHC6 308 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 NUDCD2Q8WVJ2 157 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 MRGPRFQ96AM1 343 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 PHYHIPLQ96FC7 376 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 LYZL4Q96KX0 146 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 PDCD10Q9BUL8 212 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 RBM24Q9BX46 236 aaKnown RBP12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 SELENOIQ9C0D9 397 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 PPA2Q9H2U2 334 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 SPEF1Q9Y4P9 236 aa12.51□□□□□ -0.41
NIPAL3-203ENST00000358028 KANTRA0A1W2PQU2 76 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 C5orf63A6NC05 138 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 BCL2L11O43521 198 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 DUS4LO95620 317 aaKnown RBP12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 FGF2P09038 288 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 HIST1H1DP16402 221 aaKnown RBP12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 HRH1P35367 487 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 RAC3P60763 192 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 PPP1R1AQ13522 171 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 LY6DQ14210 128 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 DCAF10Q5QP82 559 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 HOGA1Q86XE5 327 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 LRRC18Q8N456 261 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 ARRDC1Q8N5I2 433 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 SSC4DQ8WTU2 575 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 RAB3CQ96E17 227 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 CCDC120Q96HB5 630 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 CXorf58Q96LI9 332 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 C1orf147Q96MC9 270 aaPredicted RBP12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 IP6K3Q96PC2 410 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 URM1Q9BTM9 101 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms