RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 MRGPRGQ86SM5 289 aa5.9□□□□□ -1.47
TRIM38-201ENST00000357085 GCNT2Q8N0V5 402 aa5.9□□□□□ -1.47
TRIM38-201ENST00000357085 ABHD6Q9BV23 337 aa5.9□□□□□ -1.47
TRIM38-201ENST00000357085 ELOVL1Q9BW60 279 aa5.9□□□□□ -1.47
TRIM38-201ENST00000357085 MEX3AA1L020 520 aaKnown RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 H3BQ15 152 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 J3QRE1 110 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 HIST1H1DP16402 221 aaKnown RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 MEP1BQ16820 701 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 POM121L1PQ3SYA9 428 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 EXOSC6Q5RKV6 272 aaKnown RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 BTNL8Q6UX41 500 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 BAGE3Q86Y29 109 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 BAGE2Q86Y30 109 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 CISD2Q8N5K1 135 aaKnown RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 ZNF321PQ8N8H1 164 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 ZNF738Q8NE65 137 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 IL22RA2Q969J5 263 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 ZNF442Q9H7R0 627 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 CALHM2Q9HA72 323 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 CUTCQ9NTM9 273 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 TIMM10BQ9Y5J6 103 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 NGFRP08138 427 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 TIMP2P16035 220 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 ZBTB25P24278 435 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 MRPL58Q14197 206 aaKnown RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 OR52N5Q8NH56 324 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 MS4A10Q96PG2 267 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 CXCL16Q9H2A7 254 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 MMP25Q9NPA2 562 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 SLC35D1Q9NTN3 355 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 SOHLH2Q9NX45 425 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 FKBP11Q9NYL4 201 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 UQCR10Q9UDW1 63 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 SLCO1B1Q9Y6L6 691 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 FEZF1A0PJY2 475 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 PDGFBP01127 241 aaPredicted RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 ZNF888P0CJ79 500 aaPredicted RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 LPAR6P43657 344 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 HNRNPA3P51991 378 aaKnown RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 CATR1Q13166 79 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 TMEM241Q24JQ0 296 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 SLC22A6Q4U2R8 563 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 GLIPR1L1Q6UWM5 242 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 FAM216AQ8WUB2 273 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 SLC35A4Q96G79 324 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 GINS3Q9BRX5 216 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 ARV1Q9H2C2 271 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 SLC39A9Q9NUM3 307 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 SH3BGRL2Q9UJC5 107 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 DOCK8Q8NF50 2099 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 ZNF727A8MUV8 499 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 TNFRSF10CO14798 259 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 MOSPD3O75425 235 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 HOXC4P09017 264 aaPredicted RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 CEBPEQ15744 281 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 SLC36A1Q7Z2H8 476 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 OR2I1PQ8NGU4 316 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 MAGT1Q9H0U3 335 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 MBD1Q9UIS9 605 aaPredicted RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 PIAS3Q9Y6X2 628 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 KIAA1671Q9BY89 1806 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 MAP1LC3B2A6NCE7 125 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 YY2O15391 372 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 GCM2O75603 506 aaPredicted RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 TMEM184AQ6ZMB5 413 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 ZFP62Q8NB50 900 aaPredicted RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 LIPHQ8WWY8 451 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 SMIM12Q96EX1 92 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 MAP1LC3BQ9GZQ8 125 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 A6NDN8 102 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 DEDDO75618 318 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 GDF6Q6KF10 455 aaPredicted RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 C11orf42Q8N5U0 333 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 SLC25A38Q96DW6 304 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 LRFN3Q9BTN0 628 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 FBXL17Q9UF56 701 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 SHISA3A0PJX4 238 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 RRP8O43159 456 aaKnown RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 C8AP07357 584 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 C12orf54Q6X4T0 127 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 C9orf40Q8IXQ3 194 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 OR2T10Q8NGZ9 312 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 RBM7Q9Y580 266 aaKnown RBP5.89□□□□□ -1.47
TRIM38-201ENST00000357085 KNTC1P50748 2209 aa5.89□□□□□ -1.47
TRIM38-201ENST00000357085 CACNA1DQ01668 2161 aa5.88□□□□□ -1.47
TRIM38-201ENST00000357085 FAM90A10PA6NDY2 464 aa5.88□□□□□ -1.47
TRIM38-201ENST00000357085 FAM90A18PA6NE21 464 aa5.88□□□□□ -1.47
TRIM38-201ENST00000357085 FAM90A16PA6NEW6 464 aa5.88□□□□□ -1.47
TRIM38-201ENST00000357085 FAM90A20PA6NIJ5 464 aa5.88□□□□□ -1.47
TRIM38-201ENST00000357085 FAM90A8PA6NJQ4 464 aa5.88□□□□□ -1.47
TRIM38-201ENST00000357085 FAM90A7PA6NKC0 464 aa5.88□□□□□ -1.47
TRIM38-201ENST00000357085 FAM90A22PA8MWA6 464 aa5.88□□□□□ -1.47
TRIM38-201ENST00000357085 FAM90A12PA8MX19 464 aa5.88□□□□□ -1.47
TRIM38-201ENST00000357085 FAM90A5PA8MXJ8 464 aa5.88□□□□□ -1.47
TRIM38-201ENST00000357085 FAM90A23PA8MXZ1 464 aa5.88□□□□□ -1.47
TRIM38-201ENST00000357085 FAM90A15PP0C7V4 464 aa5.88□□□□□ -1.47
TRIM38-201ENST00000357085 FAM90A13PP0C7W8 464 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms