RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 ZMAT1Q5H9K5 638 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 ZNF529Q6P280 563 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 SSX8Q7RTT4 187 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 CEACAM19Q7Z692 300 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 FTMTQ8N4E7 242 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 OR5D18Q8NGL1 313 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 OR13C9Q8NGT0 318 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 OR8S1Q8NH09 359 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 PIGTQ969N2 578 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 C14orf79Q96F83 325 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 CHCHD6Q9BRQ6 235 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 WDR13Q9H1Z4 485 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 DECR2Q9NUI1 292 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 UFSP2Q9NUQ7 469 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 IL36RNQ9UBH0 155 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 FBXO9Q9UK97 447 aaPredicted RBP3.41□□□□□ -1.86
LIG4-201ENST00000356922 PMF1-BGLAPU3KQ54 211 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 A0A0B4J203 849 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 IGKV1-12A0A0C4DH73 117 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 A0A1W2PP11 408 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 DPPA5A6NC42 116 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 TMEM212A6NML5 194 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 C17orf100A8MU93 164 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 ZNF879B4DU55 563 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 CCRL2O00421 344 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 MAGEB3O15480 346 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 IGKV1D-12P01611 117 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 IGHV4-39P01824 125 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 MAS1P04201 325 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 ZNF20P17024 532 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 IGFBP3P17936 291 aaPredicted RBP3.4□□□□□ -1.86
LIG4-201ENST00000356922 GMFBP60983 142 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 VBP1P61758 197 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 SNRPD2P62316 118 aaKnown RBP3.4□□□□□ -1.86
LIG4-201ENST00000356922 PRDX4Q13162 271 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 EFNB3Q15768 340 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 FAM76BQ5HYJ3 339 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 GPR107Q5VW38 600 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 KRT74Q7RTS7 529 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 ZNF367Q7RTV3 350 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 BIVMQ86UB2 503 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 KRTAP1-3Q8IUG1 177 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 SVOPQ8N4V2 548 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 PARP16Q8N5Y8 322 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 BOLLQ8N9W6 283 aaKnown RBP3.4□□□□□ -1.86
LIG4-201ENST00000356922 SEMA6DQ8NFY4 1073 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 OR13C3Q8NGS6 347 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 OR5P3Q8WZ94 311 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 YIPF5Q969M3 257 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 S100A13Q99584 98 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 PAPOLGQ9BWT3 736 aaKnown RBP3.4□□□□□ -1.86
LIG4-201ENST00000356922 TXNL4BQ9NX01 149 aaKnown RBP3.4□□□□□ -1.86
LIG4-201ENST00000356922 CGGBP1Q9UFW8 167 aaPredicted RBP3.4□□□□□ -1.86
LIG4-201ENST00000356922 HHLA2Q9UM44 414 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 WNK2Q9Y3S1 2297 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 LOC100506127A0A0U1RQW1 187 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 A0A1B0GW55 424 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 LOC390937A0A1W2PQ73 354 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 hCG_1807616A0A1W2PRN6 198 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 ANXA2P2A6NMY6 339 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.4□□□□□ -1.86
LIG4-201ENST00000356922 CDIPTO14735 213 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 XRCC2O43543 280 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 SYNGR1O43759 233 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 ANGPTL7O43827 346 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 PLATP00750 562 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 GRPP07492 148 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 DUX4L2P0CJ85 424 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 DUX4L3P0CJ86 424 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 DUX4L4P0CJ87 422 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 DUX4L5P0CJ88 424 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 DUX4L6P0CJ89 424 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 DUX4L7P0CJ90 424 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 NPBWR2P48146 333 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 ZNF81P51508 661 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 BDH1Q02338 343 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 ZNF154Q13106 437 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 MOGQ16653 247 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 Q499Y3 187 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 DUX4L9Q6RFH8 374 aaPredicted RBP3.4□□□□□ -1.86
LIG4-201ENST00000356922 DOK3Q7L591 496 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 LRRTM1Q86UE6 522 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 ITLN1Q8WWA0 313 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 UFD1Q92890 307 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 OR2V2Q96R30 315 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 GPER1Q99527 375 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 NEK6Q9HC98 313 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 GCM1Q9NP62 436 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 CBLN4Q9NTU7 201 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 DUX4Q9UBX2 424 aa3.4□□□□□ -1.86
LIG4-201ENST00000356922 MALRD1Q5VYJ5 2156 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 ABCA1O95477 2261 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 FAM230AA0A1W2PPH8 454 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 ANKRD30BLA7E2S9 258 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 SPRY1O43609 319 aaPredicted RBP3.4□□□□□ -1.87
LIG4-201ENST00000356922 MRPS14O60783 128 aaKnown RBP3.4□□□□□ -1.87
LIG4-201ENST00000356922 MTRF1O75570 445 aaKnown RBP3.4□□□□□ -1.87
LIG4-201ENST00000356922 NRASP01111 189 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 CD2P06729 351 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 UCHL1P09936 223 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms