RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 FGF2P09038 288 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 FUT3P21217 361 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 CSRP2Q16527 193 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 CCDC144NLQ6NUI1 221 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 RNF165Q6ZSG1 346 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 PTP4A1Q93096 173 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 FCMRO60667 390 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 T-ENOLP0DO92 83 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 TAGLN2P37802 199 aaKnown RBP10.08□□□□□ -0.8
FN1-204ENST00000356005 Q56UQ5 140 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 SUMF1Q8NBK3 374 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 GNPNAT1Q96EK6 184 aaPredicted RBP10.08□□□□□ -0.8
FN1-204ENST00000356005 ZNF2Q9BSG1 426 aaPredicted RBP10.08□□□□□ -0.8
FN1-204ENST00000356005 PRSS44E7EML9 344 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 ZNF141Q15928 474 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 NTMQ9P121 344 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 FOXD3Q9UJU5 478 aaPredicted RBP10.08□□□□□ -0.8
FN1-204ENST00000356005 CDAP32320 146 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 METAP1P53582 386 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 RBM45Q8IUH3 476 aaKnown RBP10.08□□□□□ -0.8
FN1-204ENST00000356005 FCRL1Q96LA6 429 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 HRH4Q9H3N8 390 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 SP1P08047 785 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 MGMTP16455 207 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 OTOSQ8NHW6 89 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 SLC25A40Q8TBP6 338 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 MMP28Q9H239 520 aa10.08□□□□□ -0.8
FN1-204ENST00000356005 HINT3Q9NQE9 182 aaKnown RBP10.08□□□□□ -0.8
FN1-204ENST00000356005 TAAR5O14804 337 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 JTBO76095 146 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 TGM1P22735 817 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 ZNF117Q03924 483 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 SKP2Q13309 424 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 AGERQ15109 404 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 RSPO4Q2I0M5 234 aaPredicted RBP10.07□□□□□ -0.8
FN1-204ENST00000356005 CDH26Q8IXH8 852 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 RNF141Q8WVD5 230 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 DNASE2BQ8WZ79 361 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 ACTR3CQ9C0K3 210 aaPredicted RBP10.07□□□□□ -0.8
FN1-204ENST00000356005 CYTIPO60759 359 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 ALOX5APP20292 161 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 KLRB1Q12918 225 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 ASB13Q8WXK3 278 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 PTDSS2Q9BVG9 487 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 CD300AQ9UGN4 299 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 ANGPTL7O43827 346 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 SLC2A10O95528 541 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 MAGEA5P43359 124 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 SFTPA2Q8IWL1 248 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 SFTPA1Q8IWL2 248 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 RBFOX1Q9NWB1 397 aaKnown RBP10.07□□□□□ -0.8
FN1-204ENST00000356005 NPTNQ9Y639 398 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 ARPC4-TTLL3A0A0A6YYG9 625 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 IGHV3-64DA0A0J9YX35 117 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 MS4A18H0YCH9 400 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 SPP1P10451 314 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 APEHP13798 732 aaKnown RBP10.07□□□□□ -0.8
FN1-204ENST00000356005 FCGR2CP31995 323 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 LSM6P62312 80 aaKnown RBP10.07□□□□□ -0.8
FN1-204ENST00000356005 CLINT1Q14677 625 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 MS4A18Q3C1V0 323 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 LINC01555Q8NAE3 123 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 TMEM104Q8NE00 496 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 KTI12Q96EK9 354 aaPredicted RBP10.07□□□□□ -0.8
FN1-204ENST00000356005 PIMREGQ9BSJ6 248 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 ADAM20O43506 726 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 CELA2BP08218 269 aaPredicted RBP10.07□□□□□ -0.8
FN1-204ENST00000356005 CCR9P51686 369 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 CDC20Q12834 499 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 EBPQ15125 230 aaKnown RBP10.07□□□□□ -0.8
FN1-204ENST00000356005 SPANXN5Q5MJ07 72 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 DESI1Q6ICB0 168 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 VSTM2AQ8TAG5 236 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 GDF15Q99988 308 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 TMEM147Q9BVK8 224 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 C20orf27Q9GZN8 174 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 HELZP42694 1942 aaKnown RBP10.07□□□□□ -0.8
FN1-204ENST00000356005 ZNF883P0CG24 379 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 CA6P23280 308 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 HTR2BP41595 481 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 TAF9Q16594 264 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 ERGIC1Q969X5 290 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 MS4A7Q9GZW8 240 aaPredicted RBP10.07□□□□□ -0.8
FN1-204ENST00000356005 SAV1Q9H4B6 383 aaPredicted RBP10.07□□□□□ -0.8
FN1-204ENST00000356005 ZNF225Q9UK10 706 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 FZR1Q9UM11 496 aa10.07□□□□□ -0.8
FN1-204ENST00000356005 A0A0B4J2E0 115 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 A0A1B0GX12 115 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 AGPAT2O15120 278 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 SSSCA1O60232 199 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 ETV1P50549 477 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 ZNF793Q6ZN11 406 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 TMPRSS11FQ6ZWK6 438 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 RAB33BQ9H082 229 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 VWA8A3KMH1 1905 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 PCP4L1A6NKN8 68 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 FAHP16930 419 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 ZNF32P17041 273 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 UBE2KP61086 200 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 BATF2Q8N1L9 274 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms