RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 CALHM3Q86XJ0 350 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 ETFBKMTQ8IXQ9 262 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 PRSS3P2Q8NHM4 247 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 TTC9Q92623 222 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 MYOZ1Q9NP98 299 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-201ENST00000355497 NEURL1O76050 574 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 FGF2P09038 288 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 KIRREL2Q6UWL6 708 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 NT5CQ8TCD5 201 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 TAAR9Q96RI9 348 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 FOXB1Q99853 325 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 ICAM5Q9UMF0 924 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 ASB1Q9Y576 335 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 TRAV20A0A0B4J274 112 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 HRASP01112 189 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 STAG3L2P0CL84 134 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 HTR1DP28221 377 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 CEACAM6P40199 344 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 CEACAM16Q2WEN9 425 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 GGNBP1Q5YKI7 109 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 OR1L4Q8NGR5 311 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 NEIL1Q96FI4 390 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-201ENST00000355497 RBM14Q96PK6 669 aaKnown RBP13.37□□□□□ -0.27
LMX1B-201ENST00000355497 FAM117AQ9C073 453 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 GOLGA4Q13439 2230 aaKnown RBP13.36□□□□□ -0.27
LMX1B-201ENST00000355497 A0A087WUJ7 227 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 SHISA7A6NL88 538 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 ZNF716A6NP11 495 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 ADAM20O43506 726 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 LY86O95711 162 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 KRASP01116 189 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 MYOGP15173 224 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 KIR2DS2P43631 304 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 OTOSQ8NHW6 89 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 PDFQ9HBH1 243 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 SLC17A5Q9NRA2 495 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 OR5V1Q9UGF6 321 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 GNG10P50151 68 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 PPOXP50336 477 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 ASCL1P50553 236 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 TMED3Q9Y3Q3 217 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 MBTPS2O43462 519 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 TTRP02766 147 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 SPSB1Q96BD6 273 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 ANKRD34CP0C6C1 535 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 OR2Z1Q8NG97 314 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 OR5D13Q8NGL4 314 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 ZNF391Q9UJN7 358 aa13.36□□□□□ -0.27
LMX1B-201ENST00000355497 TRAV34A0A0B4J273 112 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 PGA3P0DJD8 388 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 GSG1Q2KHT4 349 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 PET117Q6UWS5 81 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 PRSS42Q7Z5A4 293 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 RAB40CQ96S21 281 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 GAL3ST2Q9H3Q3 398 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 CLDN34H7C241 214 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 FCN1O00602 326 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 FBXL14Q8N1E6 418 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 SOX15O60248 233 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 SPINK4O60575 86 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 CD200P41217 278 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 SULT1A2P50226 295 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 FAM53BQ14153 422 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 OR2A2Q6IF42 318 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 PCED1AQ9H1Q7 454 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 CLEC5AQ9NY25 188 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 WSB1Q9Y6I7 421 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 PRRT4C9JH25 899 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 PPP1CAP62136 330 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 DMRTC1Q5HYR2 192 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 CCL4L1Q8NHW4 92 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 MS4A10Q96PG2 267 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 ALKBH3Q96Q83 286 aaPredicted RBP13.35□□□□□ -0.27
LMX1B-201ENST00000355497 TAAR3PQ9P1P4 343 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 TMEM272A0A1B0GTI8 110 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 ZNF737O75373 536 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 NDUFB6O95139 128 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 SFT2D2O95562 160 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 CRYBA1P05813 215 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 MDH2P40926 338 aaKnown RBP13.35□□□□□ -0.27
LMX1B-201ENST00000355497 LPAR6P43657 344 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 SPNS3Q6ZMD2 512 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 FBXO17Q96EF6 278 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 GRAMD2BQ96HH9 432 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 FOXQ1Q9C009 403 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 SIRT3Q9NTG7 399 aaPredicted RBP13.35□□□□□ -0.27
LMX1B-201ENST00000355497 NAGKQ9UJ70 344 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 MYH13Q9UKX3 1938 aa13.35□□□□□ -0.27
LMX1B-201ENST00000355497 FUT7Q11130 342 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 SP6Q3SY56 376 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 TRAT1Q6PIZ9 186 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 SLC36A1Q7Z2H8 476 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 CXorf67Q86X51 503 aaPredicted RBP13.34□□□□□ -0.27
LMX1B-201ENST00000355497 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.34□□□□□ -0.27
LMX1B-201ENST00000355497 A0A0A6YYD5 115 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 MAP1LC3B2A6NCE7 125 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 MKRN2OSH3BPM6 223 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 CYR61O00622 381 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 FCGR3BO75015 233 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 GNG3P63215 75 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms