RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 MED13Q9UHV7 2174 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 DBX1A6NMT0 343 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 CHRM2P08172 466 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 LIFP15018 202 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 S100A10P60903 97 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 RAB32Q13637 225 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 TMEM128Q5BJH2 165 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 GTPBP8Q8N3Z3 284 aaPredicted RBP12.29□□□□□ -0.44
PGBD2-202ENST00000355360 OR5AP2Q8NGF4 316 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 LRRC46Q96FV0 321 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 PECRQ9BY49 303 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 MOB1AQ9H8S9 216 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 C12orf4Q9NQ89 552 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 ZNF107Q9UII5 783 aaPredicted RBP12.29□□□□□ -0.44
PGBD2-202ENST00000355360 PILRBQ9UKJ0 227 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 KRBOX1C9JBD0 128 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 DHHO43323 396 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 TLX3O43711 291 aaPredicted RBP12.29□□□□□ -0.44
PGBD2-202ENST00000355360 SFTPBP07988 381 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 SLC25A4P12235 298 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 CNR1P21554 472 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 OTX2P32243 289 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 MOB3CQ70IA8 216 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 HSD17B13Q7Z5P4 300 aaPredicted RBP12.29□□□□□ -0.44
PGBD2-202ENST00000355360 OR56B1Q8NGI3 324 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 FGFBP3Q8TAT2 258 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 SSC4DQ8WTU2 575 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 IMMP1LQ96LU5 166 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 FLVCR1Q9Y5Y0 555 aa12.29□□□□□ -0.44
PGBD2-202ENST00000355360 KLK3P07288 261 aaPredicted RBP12.28□□□□□ -0.44
PGBD2-202ENST00000355360 TMEM225BP0DP42 221 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 TAGLNQ01995 201 aaKnown RBP12.28□□□□□ -0.44
PGBD2-202ENST00000355360 C9orf135Q5VTT2 229 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 PMS2CLQ68D20 193 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 LPCAT3Q6P1A2 487 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 HDDC2Q7Z4H3 204 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 RPS19BP1Q86WX3 136 aaKnown RBP12.28□□□□□ -0.44
PGBD2-202ENST00000355360 TMEM123Q8N131 208 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 GJC3Q8NFK1 279 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 OR52H1Q8NGJ2 320 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 PIGQQ9BRB3 760 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 URM1Q9BTM9 101 aaKnown RBP12.28□□□□□ -0.44
PGBD2-202ENST00000355360 FAAP24Q9BTP7 215 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 SLC25A32Q9H2D1 315 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 LIME1Q9H400 295 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 CRLF2Q9HC73 371 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 MED9Q9NWA0 146 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 HPF1Q9NWY4 346 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 GPR31O00270 319 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 GSTP1P09211 210 aaKnown RBP12.28□□□□□ -0.44
PGBD2-202ENST00000355360 CCL1P22362 96 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 EIF1P41567 113 aaKnown RBP12.28□□□□□ -0.44
PGBD2-202ENST00000355360 GRB2P62993 217 aaKnown RBP12.28□□□□□ -0.44
PGBD2-202ENST00000355360 MC2RQ01718 297 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 SRSF4Q08170 494 aaKnown RBP12.28□□□□□ -0.44
PGBD2-202ENST00000355360 ZNF273Q14593 569 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 TMEM88Q6PEY1 159 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 SLC23A3Q6PIS1 610 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 SLC25A43Q8WUT9 341 aaPredicted RBP12.28□□□□□ -0.44
PGBD2-202ENST00000355360 SGK3Q96BR1 496 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 IGKV1-27A0A075B6S5 117 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 CCDC187A0A096LP49 1063 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 C3orf80F5H4A9 247 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 DHRS3O75911 302 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 RCC1P18754 421 aaPredicted RBP12.28□□□□□ -0.44
PGBD2-202ENST00000355360 SSR4P51571 173 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 ZNF345Q14585 488 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 SP6Q3SY56 376 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 PLEKHN1Q494U1 663 aaPredicted RBP12.28□□□□□ -0.44
PGBD2-202ENST00000355360 TSPO2Q5TGU0 170 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 ADPRHL1Q8NDY3 354 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 S100A13Q99584 98 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 ARPC5LQ9BPX5 153 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 FAM117AQ9C073 453 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 SLC26A1Q9H2B4 701 aa12.28□□□□□ -0.44
PGBD2-202ENST00000355360 TRAPPC6AO75865 159 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 ACTL6AO96019 429 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 GP1BAP07359 652 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 MTCP1P56278 107 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 ECH1Q13011 328 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 PAN3Q58A45 887 aaKnown RBP12.27□□□□□ -0.45
PGBD2-202ENST00000355360 TOMM40LQ969M1 308 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 PARP12Q9H0J9 701 aaKnown RBP12.27□□□□□ -0.45
PGBD2-202ENST00000355360 PLEKHJ1Q9NW61 149 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 PISDQ9UG56 409 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 NSG1A0A0A6YYJ2 146 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 ATP6V1G2-DDX39BF2Z307 99 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 CXCL13O43927 109 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 SFT2D2O95562 160 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 PTGER4P35408 488 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 ID4P47928 161 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 SUCLG1P53597 346 aaKnown RBP12.27□□□□□ -0.45
PGBD2-202ENST00000355360 CHRFAM7AQ494W8 412 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 WIPI1Q5MNZ9 446 aaPredicted RBP12.27□□□□□ -0.45
PGBD2-202ENST00000355360 TCEAL6Q6IPX3 200 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 TCEAL3Q969E4 200 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 PIK3IP1Q96FE7 263 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 CDC6Q99741 560 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 FBLN5Q9UBX5 448 aa12.27□□□□□ -0.45
PGBD2-202ENST00000355360 SERPINA5P05154 406 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms