RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ZNF239Q16600 458 aaKnown RBP10.05□□□□□ -0.8
CAPN9-202ENST00000354537 AWAT1Q58HT5 328 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 RNF144BQ7Z419 303 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 SULF2Q8IWU5 870 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 LINC00469Q8N7U9 141 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 LRTM2Q8N967 370 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 OR1J1Q8NGS3 322 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.05□□□□□ -0.8
CAPN9-202ENST00000354537 C10orf35Q96D05 121 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 MRGPRX4Q96LA9 322 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 PBDC1Q9BVG4 233 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 PRR13Q9NZ81 148 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 RHPN2P1A8MT19 583 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 GLAP06280 429 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 ZNF14P17017 642 aaPredicted RBP10.05□□□□□ -0.8
CAPN9-202ENST00000354537 P2RY1P47900 373 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 EFNA3P52797 238 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 UEVLDQ8IX04 471 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 OR6X1Q8NH79 312 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 SHDQ96IW2 340 aa10.05□□□□□ -0.8
CAPN9-202ENST00000354537 NAA11Q9BSU3 229 aaPredicted RBP10.05□□□□□ -0.8
CAPN9-202ENST00000354537 PNRC2Q9NPJ4 139 aaKnown RBP10.05□□□□□ -0.8
CAPN9-202ENST00000354537 FREM3P0C091 2139 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 IGKV1-9A0A0C4DH69 117 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 AP4M1O00189 453 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 SDCBPO00560 298 aaPredicted RBP10.04□□□□□ -0.8
CAPN9-202ENST00000354537 AGPAT2O15120 278 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 HTR3BO95264 441 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 HPNP05981 417 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 ACKR3P25106 362 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 BLVRBP30043 206 aaPredicted RBP10.04□□□□□ -0.8
CAPN9-202ENST00000354537 EIF2S3P41091 472 aaKnown RBP10.04□□□□□ -0.8
CAPN9-202ENST00000354537 ZNF133P52736 654 aaPredicted RBP10.04□□□□□ -0.8
CAPN9-202ENST00000354537 RNF4P78317 190 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 FABP9Q0Z7S8 132 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 KISS1Q15726 138 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 GGNBP1Q5YKI7 109 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 COMMD2Q86X83 199 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 PP6455Q8WZ26 134 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 GALNT14Q96FL9 552 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 TMPRSS5Q9H3S3 457 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 NIT2Q9NQR4 276 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 SDHAF3Q9NRP4 125 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 POLR1DQ9Y2S0 133 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 KCNIP3Q9Y2W7 256 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 PIAS3Q9Y6X2 628 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 IGLV3-32A0A0A0MS00 114 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 LOC102725191A0A1B0GVB3 256 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
CAPN9-202ENST00000354537 NR2C1P13056 603 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 NME1P15531 152 aaKnown RBP10.04□□□□□ -0.8
CAPN9-202ENST00000354537 HIST3H3Q16695 136 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 MIDNQ504T8 468 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 OGFOD3Q6PK18 319 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 SLC16A13Q7RTY0 426 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 SEMA6DQ8NFY4 1073 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 OR8G5Q8NG78 346 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 SPACA5Q96QH8 159 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 VN1R1Q9GZP7 353 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 SLC35B3Q9H1N7 401 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 V9GYS6 101 aa10.04□□□□□ -0.8
CAPN9-202ENST00000354537 A0A0U1RQV5 110 aa10.03□□□□□ -0.8
CAPN9-202ENST00000354537 A0A1W2PP11 408 aa10.03□□□□□ -0.8
CAPN9-202ENST00000354537 KNG1P01042 644 aa10.03□□□□□ -0.8
CAPN9-202ENST00000354537 IFNA17P01571 189 aa10.03□□□□□ -0.8
CAPN9-202ENST00000354537 SNRNP70P08621 437 aaKnown RBP10.03□□□□□ -0.8
CAPN9-202ENST00000354537 FKBP2P26885 142 aaKnown RBP10.03□□□□□ -0.8
CAPN9-202ENST00000354537 LSM6P62312 80 aaKnown RBP10.03□□□□□ -0.8
CAPN9-202ENST00000354537 ACY1Q03154 408 aa10.03□□□□□ -0.8
CAPN9-202ENST00000354537 FOXF1Q12946 379 aa10.03□□□□□ -0.8
CAPN9-202ENST00000354537 IL13RA2Q14627 380 aa10.03□□□□□ -0.8
CAPN9-202ENST00000354537 RBMS3Q6XE24 437 aaKnown RBP10.03□□□□□ -0.8
CAPN9-202ENST00000354537 FAM219AQ8IW50 185 aa10.03□□□□□ -0.8
CAPN9-202ENST00000354537 FAM71F1Q96KD3 344 aaPredicted RBP10.03□□□□□ -0.8
CAPN9-202ENST00000354537 EMC6Q9BV81 110 aa10.03□□□□□ -0.8
CAPN9-202ENST00000354537 C19orf12Q9NSK7 152 aa10.03□□□□□ -0.8
CAPN9-202ENST00000354537 ZNF319Q9P2F9 582 aa10.03□□□□□ -0.8
CAPN9-202ENST00000354537 ATG2BQ96BY7 2078 aa10.03□□□□□ -0.8
CAPN9-202ENST00000354537 CACNA1CQ13936 2221 aa10.03□□□□□ -0.8
CAPN9-202ENST00000354537 H7C1Q1 480 aa10.02□□□□□ -0.8
CAPN9-202ENST00000354537 RPUSD3Q6P087 351 aaKnown RBP10.02□□□□□ -0.8
CAPN9-202ENST00000354537 CRIP3Q6Q6R5 217 aa10.02□□□□□ -0.8
CAPN9-202ENST00000354537 LRRC18Q8N456 261 aa10.02□□□□□ -0.8
CAPN9-202ENST00000354537 NTNG2Q96CW9 530 aa10.02□□□□□ -0.8
CAPN9-202ENST00000354537 ZNF2Q9BSG1 426 aaPredicted RBP10.02□□□□□ -0.8
CAPN9-202ENST00000354537 SUCNR1Q9BXA5 334 aa10.02□□□□□ -0.8
CAPN9-202ENST00000354537 SPACA1Q9HBV2 294 aa10.02□□□□□ -0.8
CAPN9-202ENST00000354537 SLC2A4RGQ9NR83 387 aa10.02□□□□□ -0.8
CAPN9-202ENST00000354537 SEMA5BQ9P283 1151 aa10.02□□□□□ -0.8
CAPN9-202ENST00000354537 YKT6O15498 198 aa10.02□□□□□ -0.81
CAPN9-202ENST00000354537 DTYMKP23919 212 aa10.02□□□□□ -0.81
CAPN9-202ENST00000354537 CAMLGP49069 296 aa10.02□□□□□ -0.81
CAPN9-202ENST00000354537 SLC35A1P78382 337 aa10.02□□□□□ -0.81
CAPN9-202ENST00000354537 ZNF283Q8N7M2 679 aa10.02□□□□□ -0.81
CAPN9-202ENST00000354537 OR1L3Q8NH93 324 aa10.02□□□□□ -0.81
CAPN9-202ENST00000354537 STT3BQ8TCJ2 826 aa10.02□□□□□ -0.81
CAPN9-202ENST00000354537 HAS2Q92819 552 aa10.02□□□□□ -0.81
CAPN9-202ENST00000354537 OXGR1Q96P68 337 aa10.02□□□□□ -0.81
CAPN9-202ENST00000354537 S100A13Q99584 98 aa10.02□□□□□ -0.81
CAPN9-202ENST00000354537 TGIF2Q9GZN2 237 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms