RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SLC7A2P52569 658 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 DEFB112Q30KQ8 113 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 MS4A18Q3C1V0 323 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 PAN3Q58A45 887 aaKnown RBP9.41□□□□□ -0.9
RTN3-204ENST00000354497 BTNL3Q6UXE8 466 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 CYP2R1Q6VVX0 501 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 BRD3OSQ6XYD6 125 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 ZER1Q7Z7L7 766 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 SLC22A24Q8N4F4 322 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 OR1J2Q8NGS2 313 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 OR6X1Q8NH79 312 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 CMTM3Q96MX0 182 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 PANX1Q96RD7 426 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 GABARAPL1Q9H0R8 117 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 C1orf198Q9H425 327 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 PATZ1Q9HBE1 687 aaKnown RBP9.41□□□□□ -0.9
RTN3-204ENST00000354497 SMURF1Q9HCE7 757 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 ASIC5Q9NY37 505 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 MGAT4AQ9UM21 535 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 RNF114Q9Y508 228 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 ARHGAP32A7KAX9 2087 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 A0A087WUJ7 227 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 A0A1W2PQ09 198 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 G3V4G9 280 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 NME4O00746 187 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 SDHDO14521 159 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 MITFO75030 526 aaPredicted RBP9.4□□□□□ -0.9
RTN3-204ENST00000354497 PTHP01270 115 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 IGHV3-13P01766 116 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 FCER2P06734 321 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 ANXA3P12429 323 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 SELEP16581 610 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 CD80P33681 288 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 APLNRP35414 380 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 LIPAP38571 399 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 MPV17P39210 176 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 CDKN2CP42773 168 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 CRATP43155 626 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 BIDP55957 195 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 PLP2Q04941 152 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 ECH1Q13011 328 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 HNF4GQ14541 408 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 HLXQ14774 488 aaPredicted RBP9.4□□□□□ -0.9
RTN3-204ENST00000354497 ZNF79Q15937 498 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 LCN1P1Q5VSP4 162 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 DHRS7BQ6IAN0 325 aaPredicted RBP9.4□□□□□ -0.9
RTN3-204ENST00000354497 TMPRSS11FQ6ZWK6 438 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 SSX9Q7RTT3 188 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 SLC16A14Q7RTX9 510 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 MS4A15Q8N5U1 240 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 OR8D4Q8NGM9 314 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 Q96MT0 163 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 ZBTB18Q99592 522 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 C11orf54Q9H0W9 315 aaPredicted RBP9.4□□□□□ -0.9
RTN3-204ENST00000354497 METTL9Q9H1A3 318 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 AKTIPQ9H8T0 292 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 MEAF6Q9HAF1 191 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 NIT2Q9NQR4 276 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 CALML5Q9NZT1 146 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 MAGEL2Q9UJ55 1249 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 GPR45Q9Y5Y3 372 aa9.4□□□□□ -0.9
RTN3-204ENST00000354497 LOC102725191A0A1B0GVB3 256 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 SRRM5B3KS81 715 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 C11orf98E9PRG8 122 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 NDUFA7O95182 113 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 MT-ND2P03891 347 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 COX5BP10606 129 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 ETFAP13804 333 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 SLC6A9P48067 706 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 RGS6P49758 472 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 CRISP3P54108 245 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 TNFAIP6P98066 277 aaPredicted RBP9.39□□□□□ -0.91
RTN3-204ENST00000354497 CYP51A1Q16850 503 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 ZNF718Q3SXZ3 478 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 SLC36A2Q495M3 483 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 SPRNQ5BIV9 151 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 DDI2Q5TDH0 399 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 HACD4Q5VWC8 232 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 UQCC3Q6UW78 93 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 Q6ZPA2 131 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 C9orf139Q6ZV77 190 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 REC114Q7Z4M0 266 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 ADPRHL1Q8NDY3 354 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 OR4K5Q8NGD3 323 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 OR10S1Q8NGN2 331 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 OR5K1Q8NHB7 308 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 CCDC115Q96NT0 180 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 ERMAPQ96PL5 475 aaPredicted RBP9.39□□□□□ -0.91
RTN3-204ENST00000354497 CHIAQ9BZP6 476 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 SLC6A13Q9NSD5 602 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 METTL1Q9UBP6 276 aaKnown RBP9.39□□□□□ -0.91
RTN3-204ENST00000354497 WNK2Q9Y3S1 2297 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 IGKV1D-42A0A075B6H8 117 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 TMEM210A6NLX4 147 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 PLA2G10O15496 165 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 FABP7O15540 132 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 GPX5O75715 221 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 RLN2P04090 185 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 PAICSP22234 425 aaKnown RBP9.39□□□□□ -0.91
RTN3-204ENST00000354497 PMELP40967 661 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms