RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 NABP1Q96AH0 204 aa11.25□□□□□ -0.61
CLK3-201ENST00000345005 PRRG4Q9BZD6 226 aa11.25□□□□□ -0.61
CLK3-201ENST00000345005 MOB1AQ9H8S9 216 aa11.25□□□□□ -0.61
CLK3-201ENST00000345005 ZDHHC11Q9H8X9 412 aa11.25□□□□□ -0.61
CLK3-201ENST00000345005 RNF122Q9H9V4 155 aa11.25□□□□□ -0.61
CLK3-201ENST00000345005 FAM206AQ9NX38 181 aa11.25□□□□□ -0.61
CLK3-201ENST00000345005 ARHGAP21Q5T5U3 1957 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 DCDC2BA2VCK2 349 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 OR5H14A6NHG9 310 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 H7C2Y5 167 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 LGALS8O00214 317 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 RER1O15258 196 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 SCGNO76038 276 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 CD37P11049 281 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 POU3F4P49335 361 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 ENDOGQ14249 297 aaKnown RBP11.24□□□□□ -0.61
CLK3-201ENST00000345005 C2orf76Q3KRA6 126 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 PAN3Q58A45 887 aaKnown RBP11.24□□□□□ -0.61
CLK3-201ENST00000345005 RAB12Q6IQ22 244 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 FAAP20Q6NZ36 180 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 OR5M8Q8NGP6 311 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 ASB5Q8WWX0 329 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 FOXRED1Q96CU9 486 aaPredicted RBP11.24□□□□□ -0.61
CLK3-201ENST00000345005 LRRC46Q96FV0 321 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 PRRT1Q99946 306 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 NKX6-2Q9C056 277 aaPredicted RBP11.24□□□□□ -0.61
CLK3-201ENST00000345005 POFUT1Q9H488 388 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 GPR160Q9UJ42 338 aa11.24□□□□□ -0.61
CLK3-201ENST00000345005 PURGQ9UJV8 347 aaKnown RBP11.24□□□□□ -0.61
CLK3-201ENST00000345005 TNRC6AQ8NDV7 1962 aaKnown RBP11.24□□□□□ -0.61
CLK3-201ENST00000345005 A0A1B0GTI1 187 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 MED19A0JLT2 244 aaPredicted RBP11.23□□□□□ -0.61
CLK3-201ENST00000345005 DNASE2O00115 360 aaPredicted RBP11.23□□□□□ -0.61
CLK3-201ENST00000345005 MRPL33O75394 65 aaKnown RBP11.23□□□□□ -0.61
CLK3-201ENST00000345005 KDM4BO94953 1096 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 SPDEFO95238 335 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 SIX6O95475 246 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 CYB5AP00167 134 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 CD74P04233 296 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 CTSSP25774 331 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 HIST1H3AP68431 136 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 RNPS1Q15287 305 aaKnown RBP11.23□□□□□ -0.61
CLK3-201ENST00000345005 RNFT1Q5M7Z0 435 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 HIST2H3PS2Q5TEC6 136 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 C11orf87Q6NUJ2 197 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 ZNF600Q6ZNG1 722 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 HIST2H3AQ71DI3 136 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 SVBPQ8N300 66 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 OR51D1Q8NGF3 324 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 OR13C3Q8NGS6 347 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 PBOV1Q9GZY1 135 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 ATG5Q9H1Y0 275 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 CRLF2Q9HC73 371 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 PNRC2Q9NPJ4 139 aaKnown RBP11.23□□□□□ -0.61
CLK3-201ENST00000345005 BIN3Q9NQY0 253 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 SLC2A8Q9NY64 477 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 TNFSF18Q9UNG2 199 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 PLEKHA6Q9Y2H5 1048 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 CSAG2Q9Y5P2 127 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 SPTBN2O15020 2390 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 FREM1Q5H8C1 2179 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 TRAV8-7A0A075B6U6 113 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 LOC107986453A0A1B0GWG9 222 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 POM121CA8CG34 1229 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 ZNF724A8MTY0 619 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 H3BSH0 61 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 GATCO43716 136 aaKnown RBP11.23□□□□□ -0.61
CLK3-201ENST00000345005 CD3DP04234 171 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 CST2P09228 141 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 CD34P28906 385 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 FAM166AQ6J272 317 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 LRRC18Q8N456 261 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 ZDHHC22Q8N966 263 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 INO80EQ8NBZ0 244 aaPredicted RBP11.23□□□□□ -0.61
CLK3-201ENST00000345005 STEAP2Q8NFT2 490 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 ZNF837Q96EG3 531 aaPredicted RBP11.23□□□□□ -0.61
CLK3-201ENST00000345005 WDR89Q96FK6 387 aaPredicted RBP11.23□□□□□ -0.61
CLK3-201ENST00000345005 C12orf57Q99622 126 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 C1QTNF6Q9BXI9 259 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 LINC00470Q9BZP3 86 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 GPR35Q9HC97 309 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 TMEM38BQ9NVV0 291 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 COA4Q9NYJ1 87 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 LIPGQ9Y5X9 500 aa11.23□□□□□ -0.61
CLK3-201ENST00000345005 ZNF736B4DX44 427 aaPredicted RBP11.22□□□□□ -0.61
CLK3-201ENST00000345005 P2RY10O00398 339 aa11.22□□□□□ -0.61
CLK3-201ENST00000345005 KLK10O43240 276 aa11.22□□□□□ -0.61
CLK3-201ENST00000345005 EFSO43281 561 aa11.22□□□□□ -0.61
CLK3-201ENST00000345005 TTRP02766 147 aa11.22□□□□□ -0.61
CLK3-201ENST00000345005 RLN2P04090 185 aa11.22□□□□□ -0.61
CLK3-201ENST00000345005 FSTP19883 344 aa11.22□□□□□ -0.61
CLK3-201ENST00000345005 TBPP20226 339 aa11.22□□□□□ -0.61
CLK3-201ENST00000345005 RAB6AP20340 208 aa11.22□□□□□ -0.61
CLK3-201ENST00000345005 RAB13P51153 203 aa11.22□□□□□ -0.61
CLK3-201ENST00000345005 PRKXP51817 358 aa11.22□□□□□ -0.61
CLK3-201ENST00000345005 SSTP61278 116 aa11.22□□□□□ -0.61
CLK3-201ENST00000345005 CYCSP99999 105 aaKnown RBP11.22□□□□□ -0.61
CLK3-201ENST00000345005 DEFA5Q01523 94 aa11.22□□□□□ -0.61
CLK3-201ENST00000345005 C2orf68Q2NKX9 166 aa11.22□□□□□ -0.61
CLK3-201ENST00000345005 DCAF12L2Q5VW00 463 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms