RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 KPTNQ9Y664 436 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 IGHV1-69DA0A0B4J2H0 117 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 AKR7A2O43488 359 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 CST4P01036 141 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 IGHV1-69P01742 117 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 MMP9P14780 707 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 ALOX5APP20292 161 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 SLC2A5P22732 501 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 GABRA2P47869 451 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 DAPP51397 102 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 GPM6AP51674 278 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 RIDAP52758 137 aaKnown RBP10.25□□□□□ -0.77
SGCA-202ENST00000344627 PTGES3Q15185 160 aaKnown RBP10.25□□□□□ -0.77
SGCA-202ENST00000344627 CEP78Q5JTW2 689 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 FIP1L1Q6UN15 594 aaKnown RBP10.25□□□□□ -0.77
SGCA-202ENST00000344627 MOB3CQ70IA8 216 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 LDLRAD3Q86YD5 345 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 PAPD5Q8NDF8 572 aaKnown RBP10.25□□□□□ -0.77
SGCA-202ENST00000344627 OR5K1Q8NHB7 308 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 NRBF2Q96F24 287 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 CADM1Q9BY67 442 aaKnown RBP10.25□□□□□ -0.77
SGCA-202ENST00000344627 PRRG3Q9BZD7 231 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 KRT84Q9NSB2 600 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 HAO2Q9NYQ3 351 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 C1RLQ9NZP8 487 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 RPUSD1Q9UJJ7 312 aaKnown RBP10.25□□□□□ -0.77
SGCA-202ENST00000344627 ZNF391Q9UJN7 358 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 FAM96BQ9Y3D0 163 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 TMEM14AQ9Y6G1 99 aa10.25□□□□□ -0.77
SGCA-202ENST00000344627 ZNF816-ZNF321PA0A0X1KG74 233 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 A0A1B0GVI7 797 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 CCDC182A6NF36 153 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 ZNF732B4DXR9 585 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 G3V2T6 193 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 M0R129 80 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 PRKYO43930 277 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 CLPXO76031 633 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 TFF1P04155 84 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 MELTFP08582 738 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 NDUFB7P17568 137 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 GLRA1P23415 457 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 ESRRGP62508 458 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 GNG3P63215 75 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 RIPPLY1Q0D2K3 151 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 DMRTC1Q5HYR2 192 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 PLCXD3Q63HM9 321 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 BRICD5Q6PL45 260 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 METAP1DQ6UB28 335 aaPredicted RBP10.24□□□□□ -0.77
SGCA-202ENST00000344627 VMO1Q7Z5L0 202 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 BCDIN3DQ7Z5W3 292 aaKnown RBP10.24□□□□□ -0.77
SGCA-202ENST00000344627 CMTM4Q8IZR5 234 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 OR10Z1Q8NGY1 313 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 OR51E1Q8TCB6 317 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 ASB17Q8WXJ9 295 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 ITFG2Q969R8 447 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 C12orf43Q96C57 262 aaKnown RBP10.24□□□□□ -0.77
SGCA-202ENST00000344627 PBOV1Q9GZY1 135 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 SIRPDQ9H106 197 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 TLNRD1Q9H1K6 362 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 WDR13Q9H1Z4 485 aa10.24□□□□□ -0.77
SGCA-202ENST00000344627 CMYA5Q8N3K9 4069 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 A0A1W2PQ09 198 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 A0A1W2PRD5 423 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 A0A1W2PRF3 423 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 A0A1W2PRM7 423 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 BTBD17A6NE02 478 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 ACOD1A6NK06 481 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.23□□□□□ -0.77
SGCA-202ENST00000344627 MITFO75030 526 aaPredicted RBP10.23□□□□□ -0.77
SGCA-202ENST00000344627 ZNF254O75437 659 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 FCN3O75636 299 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 SELLP14151 372 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 RASSF2P50749 326 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 CAPZA1P52907 286 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 ACTR3P61158 418 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 GUCA2AQ02747 115 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 PRB3Q04118 309 aaPredicted RBP10.23□□□□□ -0.77
SGCA-202ENST00000344627 ZNF829Q3KNS6 432 aaPredicted RBP10.23□□□□□ -0.77
SGCA-202ENST00000344627 CDONQ4KMG0 1287 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 MIDNQ504T8 468 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 STUMQ69YW2 141 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 FAHD1Q6P587 224 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 DEGS2Q6QHC5 323 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 MEPCEQ7L2J0 689 aaKnown RBP10.23□□□□□ -0.77
SGCA-202ENST00000344627 AMIGO2Q86SJ2 522 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 ZNF679Q8IYX0 411 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 KIR3DL3Q8N743 410 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 TCEANCQ8N8B7 351 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 ZNF671Q8TAW3 534 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 UTP4Q969X6 686 aaKnown RBP10.23□□□□□ -0.77
SGCA-202ENST00000344627 PPP1R14AQ96A00 147 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 MED30Q96HR3 178 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 CNN2Q99439 309 aaKnown RBP10.23□□□□□ -0.77
SGCA-202ENST00000344627 APOL4Q9BPW4 351 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 CHIAQ9BZP6 476 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 DNTTIP1Q9H147 329 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 GPR84Q9NQS5 396 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 SIRT7Q9NRC8 400 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 FAM206AQ9NX38 181 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 SLC25A10Q9UBX3 287 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms