RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 TLNRD1Q9H1K6 362 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 HEXA-AS1Q9H8Q6 139 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 CALHM2Q9HA72 323 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 NECAP2Q9NVZ3 263 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 KPTNQ9Y664 436 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 SNRNP200O75643 2136 aaKnown RBP11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 C2CD4DB7Z1M9 353 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 MBTPS2O43462 519 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 SYNGR4O95473 234 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 H2AFB1P0C5Y9 115 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 ELLP55199 621 aaPredicted RBP11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 UNQ9370/PRO34162Q6UXP9 181 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 FBXL14Q8N1E6 418 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 C17orf78Q8N4C9 275 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 TNFSF18Q9UNG2 199 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 ST3GAL6Q9Y274 331 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 TGFBR3LH3BV60 316 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 GSTP1P09211 210 aaKnown RBP11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 RBP2P50120 134 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 TMEM33P57088 247 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 SSBP1Q04837 148 aaKnown RBP11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 EGR4Q05215 589 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 GGTLC2Q14390 218 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 OPN5Q6U736 354 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 SLC25A26Q70HW3 274 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 CATSPERDQ86XM0 798 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 ARRDC1Q8N5I2 433 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 ZDHHC22Q8N966 263 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 DTWD2Q8NBA8 298 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 ST8SIA1Q92185 356 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 PRRX2Q99811 253 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 NIPSNAP3BQ9BS92 247 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 ABI3Q9P2A4 366 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 GNG13Q9P2W3 67 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 ZNF98A6NK75 572 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 GPR37O15354 613 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 PTGFRP43088 359 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 ZNF684Q5T5D7 378 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 AADACL3Q5VUY0 350 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 OR8G2PQ6IF36 304 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 C9orf40Q8IXQ3 194 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 OR8B12Q8NGG6 310 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 PSMF1Q92530 271 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 DYRK2Q92630 601 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 CTHRC1Q96CG8 243 aa11.04□□□□□ -0.64
SNRNP48-201ENST00000342415 LOC101059948A0A1B0GTJ6 334 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 hCG_1809904A0A1W2PP81 198 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 A0A1W2PR64 198 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 A0A1W2PRV1 198 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 TRAPPC2LH3BP13 241 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 C1QL1O75973 258 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 SMIM10L1P0DMW3 83 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 CARD18P57730 90 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 GRB2P62993 217 aaKnown RBP11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 DEFA6Q01524 100 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 GUK1Q16774 197 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 OR2B11Q5JQS5 317 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 SLC25A42Q86VD7 318 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 NECAP1Q8NC96 275 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 SLC25A28Q96A46 364 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 SMIM10Q96HG1 83 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 SARGQ9BW04 601 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 SLC17A5Q9NRA2 495 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 OR5AC2Q9NZP5 309 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 AK3Q9UIJ7 227 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 KCNMB2Q9Y691 235 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 PHF3Q92576 2039 aaKnown RBP11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 CDC14BO60729 498 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 MRPL33O75394 65 aaKnown RBP11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 SFT2D2O95562 160 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 ABHD16AO95870 558 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 RPS4Y1P22090 263 aaKnown RBP11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 NPBWR1P48145 328 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 LYSMD4Q5XG99 296 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 TMPPEQ6ZT21 453 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 MCHR2Q969V1 340 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 GABRG3Q99928 467 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 UQCC2Q9BRT2 126 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 WBP1LQ9NX94 342 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 ACACAQ13085 2346 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 PLXND1Q9Y4D7 1925 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 HSPB2A8KAH6 182 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 CTRB1P17538 263 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 RPS16P62249 146 aaKnown RBP11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 HSPB2Q16082 182 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 CTRB2Q6GPI1 263 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 MAML2Q8IZL2 1156 aaPredicted RBP11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 RBMXL1Q96E39 390 aaKnown RBP11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 RAB33BQ9H082 229 aa11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 ESRP2Q9H6T0 727 aaKnown RBP11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 LAMA2P24043 3122 aaKnown RBP11.03□□□□□ -0.64
SNRNP48-201ENST00000342415 TRBV5-5A0A0J9YX44 114 aa11.02□□□□□ -0.64
SNRNP48-201ENST00000342415 OR2A4O95047 310 aa11.02□□□□□ -0.64
SNRNP48-201ENST00000342415 BGLAPP02818 100 aa11.02□□□□□ -0.64
SNRNP48-201ENST00000342415 GAB4Q2WGN9 574 aa11.02□□□□□ -0.64
SNRNP48-201ENST00000342415 ZNF658BQ4V348 819 aaPredicted RBP11.02□□□□□ -0.64
SNRNP48-201ENST00000342415 NCMAPQ5T1S8 102 aa11.02□□□□□ -0.64
SNRNP48-201ENST00000342415 OR2A7Q96R45 310 aa11.02□□□□□ -0.64
SNRNP48-201ENST00000342415 SLC25A31Q9H0C2 315 aa11.02□□□□□ -0.64
SNRNP48-201ENST00000342415 MED9Q9NWA0 146 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms