RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 PRDX4Q13162 271 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 DGCR6Q14129 220 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 TIGD6Q17RP2 521 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 FAM76BQ5HYJ3 339 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 FKBP9P1Q75LS8 142 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 HPSE2Q8WWQ2 592 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 STON2Q8WXE9 905 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 OR5P3Q8WZ94 311 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 LYZL4Q96KX0 146 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 MICU1Q9BPX6 476 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 IFT27Q9BW83 186 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 RTL8AQ9BWD3 113 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 CMTM6Q9NX76 183 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 PITPNC1Q9UKF7 332 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 RAB21Q9UL25 225 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 LSM4Q9Y4Z0 139 aaKnown RBP13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 COMMD3-BMI1R4GMX3 469 aa13.08□□□□□ -0.32
NECTIN1-202ENST00000340882 DIRAS1O95057 198 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 ARG1P05089 322 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 ANXA2P07355 339 aaKnown RBP13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 SPARCP09486 303 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 ACKR3P25106 362 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 LMO1P25800 156 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 SLC6A6P31641 620 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 CX3CR1P49238 355 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 CAPZA1P52907 286 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 DLX6P56179 175 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 RPL31P62899 125 aaKnown RBP13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 TAF13Q15543 124 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 GFOD2Q3B7J2 385 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 KHDC1LQ5JSQ8 128 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 FAM57BQ71RH2 274 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 CD177Q8N6Q3 437 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 OR52J3Q8NH60 311 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 MUC7Q8TAX7 377 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 TFAP2CQ92754 450 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 DPF1Q92782 380 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 MALSU1Q96EH3 234 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 SDSLQ96GA7 329 aa13.07□□□□□ -0.32
NECTIN1-202ENST00000340882 LCE6AA0A183 80 aa13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 MEX3AA1L020 520 aaKnown RBP13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 H0YHG0 523 aa13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 F2RL2O00254 374 aa13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 CXCR6O00574 342 aa13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 SERPINA1P01009 418 aa13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 CEBPDP49716 269 aaPredicted RBP13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 IL5RAQ01344 420 aa13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 C18orf65Q6ZTR6 163 aa13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 KCTD8Q6ZWB6 473 aa13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 ZNF511Q8NB15 262 aa13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 PROKR2Q8NFJ6 384 aa13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 RNF170Q96K19 258 aa13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 NDUFAF4Q9P032 175 aa13.06□□□□□ -0.32
NECTIN1-202ENST00000340882 SH2D7A6NKC9 451 aaPredicted RBP13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 TMEM210A6NLX4 147 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 ANXA2P2A6NMY6 339 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 ZNF878C9JN71 531 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 NPPAP01160 153 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 ALDOBP05062 364 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 DYNLT3P51808 116 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 DCTN2Q13561 401 aaKnown RBP13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 COQ5Q5HYK3 327 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 ZNF626Q68DY1 528 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 CYP4Z1Q86W10 505 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 OR4C15Q8NGM1 316 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 OR2T27Q8NH04 317 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 FOXRED1Q96CU9 486 aaPredicted RBP13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 BRD7Q9NPI1 651 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 USE1Q9NZ43 259 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 DNAJC27Q9NZQ0 273 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 TBL2Q9Y4P3 447 aaKnown RBP13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 LRP12Q9Y561 859 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 HILPDAQ9Y5L2 63 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 MPC1Q9Y5U8 109 aa13.05□□□□□ -0.32
NECTIN1-202ENST00000340882 DHRS12A0PJE2 317 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 C17orf98A8MV24 154 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 FAM90A22PA8MWA6 464 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 ZNF593O00488 134 aaPredicted RBP13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 CLIC3O95833 236 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 LPLP06858 475 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 ENTPD1P49961 510 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 GPM6AP51674 278 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 ZNF121P58317 390 aaPredicted RBP13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 DGCR2P98153 550 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 KLHL22Q53GT1 634 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 THAP5Q7Z6K1 395 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 CPLX4Q7Z7G2 160 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 CSNK2A3Q8NEV1 391 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 PIGCQ92535 297 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 DHRS1Q96LJ7 313 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 PRR25Q96S07 402 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 ZNF649Q9BS31 505 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 GPR61Q9BZJ8 451 aa13.04□□□□□ -0.32
NECTIN1-202ENST00000340882 A0A0G2JND7 137 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 RFPL4AA6NLU0 287 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 RFPL4AL1F8VTS6 287 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 MTRF1O75570 445 aaKnown RBP13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 GYPBP06028 91 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 PIPP12273 146 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms