RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ZNF649Q9BS31 505 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 AMBNQ9NP70 447 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 CTSZQ9UBR2 303 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 PIGLQ9Y2B2 252 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 LOC105371242A0A075B767 164 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 SNTNA6NMZ2 147 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 MTRF1O75570 445 aaKnown RBP12.82□□□□□ -0.36
VAPA-201ENST00000340541 FCN3O75636 299 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 VENTXO95231 258 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 CLIC3O95833 236 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 IGHA1P01876 353 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 ZNF12P17014 697 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 KIR3DL2P43630 455 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 COMPP49747 757 aaPredicted RBP12.82□□□□□ -0.36
VAPA-201ENST00000340541 CEACAM21Q3KPI0 293 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 ESCO2Q56NI9 601 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 CEP78Q5JTW2 689 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 OGFRL1Q5TC84 451 aaPredicted RBP12.82□□□□□ -0.36
VAPA-201ENST00000340541 THAP5Q7Z6K1 395 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 ACBD7Q8N6N7 88 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 SCCPDHQ8NBX0 429 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 RPL3LQ92901 407 aaKnown RBP12.82□□□□□ -0.36
VAPA-201ENST00000340541 Q96MT0 163 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 SSBP3Q9BWW4 388 aaPredicted RBP12.82□□□□□ -0.36
VAPA-201ENST00000340541 C8orf4Q9NR00 106 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 MRPS18AQ9NVS2 196 aaKnown RBP12.82□□□□□ -0.36
VAPA-201ENST00000340541 ENPP5Q9UJA9 477 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 GNG8Q9UK08 70 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 MYRFQ9Y2G1 1151 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 PCDHGB1Q9Y5G3 927 aa12.82□□□□□ -0.36
VAPA-201ENST00000340541 IGHV3OR15-7A0A075B7D8 119 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 DAPL1A0PJW8 107 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 DHRS7CA6NNS2 312 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 SRRM5B3KS81 715 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 FSHBP01225 129 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 PITPNBP48739 271 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 GPM6AP51674 278 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 OR12D2P58182 307 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 NANOS3P60323 173 aaKnown RBP12.81□□□□□ -0.36
VAPA-201ENST00000340541 ADARB1P78563 741 aaKnown RBP12.81□□□□□ -0.36
VAPA-201ENST00000340541 SMN1Q16637 294 aaKnown RBP12.81□□□□□ -0.36
VAPA-201ENST00000340541 ODF4Q2M2E3 257 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 ZNF691Q5VV52 312 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 FDX2Q6P4F2 183 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 MOB3CQ70IA8 216 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 DOK3Q7L591 496 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.81□□□□□ -0.36
VAPA-201ENST00000340541 ZNF555Q8NEP9 628 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 OR8B3Q8NGG8 313 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 FAM216AQ8WUB2 273 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 SEH1LQ96EE3 360 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 OR8B2Q96RD0 313 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 JMJD8Q96S16 334 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 OR51I2Q9H344 312 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 C7orf69Q9H7B7 122 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 INSIG2Q9Y5U4 225 aa12.81□□□□□ -0.36
VAPA-201ENST00000340541 TRAV38-1A0A0B4J264 116 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 A6NIN4 97 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 OR5B21A6NL26 309 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 ZNF732B4DXR9 585 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 GYPAP02724 150 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 ADRA2CP18825 462 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 AMY2BP19961 511 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 CFPP27918 469 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 GNB2P62879 340 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 GNG3P63215 75 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 ELF3P78545 371 aaPredicted RBP12.8□□□□□ -0.36
VAPA-201ENST00000340541 RAB40BQ12829 278 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 KCNJ8Q15842 424 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 PLCXD3Q63HM9 321 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 WDR25Q64LD2 544 aaPredicted RBP12.8□□□□□ -0.36
VAPA-201ENST00000340541 KCTD8Q6ZWB6 473 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 NLRC3Q7RTR2 1065 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 FAM220AQ7Z4H9 259 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 C1QL2Q7Z5L3 287 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 KCTD20Q7Z5Y7 419 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 OR5A2Q8NGI9 324 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 OR52I1Q8NGK6 324 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 OR10Z1Q8NGY1 313 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 OR2G2Q8NGZ5 317 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 PELI1Q96FA3 418 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 HIST1H2AAQ96QV6 131 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 WDR13Q9H1Z4 485 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 SMURF1Q9HCE7 757 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 TRIM36Q9NQ86 728 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 FRRS1LQ9P0K9 344 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 NKX1-2Q9UD57 310 aaPredicted RBP12.8□□□□□ -0.36
VAPA-201ENST00000340541 OR5V1Q9UGF6 321 aa12.8□□□□□ -0.36
VAPA-201ENST00000340541 IGHV2-70DA0A0C4DH43 119 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 H3BSH0 61 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 TRIM77I1YAP6 450 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 ADAM20O43506 726 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 NDUFA2O43678 99 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 RHBDL1O75783 438 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 NRASP01111 189 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 MUC1P15941 1255 aaPredicted RBP12.79□□□□□ -0.36
VAPA-201ENST00000340541 HILS1P60008 231 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 PAX8Q06710 450 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 GALEQ14376 348 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 CLVS2Q5SYC1 327 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms