RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 IFNA2P01563 188 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 GFRA1P56159 465 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 RRAS2P62070 204 aaPredicted RBP11.28□□□□□ -0.6
LIN54-201ENST00000340417 RPS4XP62701 263 aaKnown RBP11.28□□□□□ -0.6
LIN54-201ENST00000340417 VKORC1Q9BQB6 163 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 ADAM19Q9H013 955 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 LYRM1O43325 122 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 IGKV3-11P04433 115 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 CLEC3BP05452 202 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 CT45A6P0DMU7 189 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 CT45A5P0DMU8 189 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 CT45A7P0DMV0 189 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 HLA-DOBP13765 273 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 CBR1P16152 277 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 VMA21Q3ZAQ7 101 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 CT45A1Q5HYN5 189 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 CT45A3Q8NHU0 189 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 CHST6Q9GZX3 395 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 HES4Q9HCC6 221 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 OR6C3Q9NZP0 311 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 TNFSF12O43508 249 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 HPNP05981 417 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 IL11P20809 199 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 AGTR1P30556 359 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 ECI1P42126 302 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 SRSF6Q13247 344 aaKnown RBP11.28□□□□□ -0.6
LIN54-201ENST00000340417 HNF4GQ14541 408 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 AKR1C8PQ5T2L2 129 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 HGDQ93099 445 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 OR2M2Q96R28 347 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 CHCHD2Q9Y6H1 151 aaPredicted RBP11.28□□□□□ -0.6
LIN54-201ENST00000340417 KITLGP21583 273 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 LYG1Q8N1E2 194 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 RPL3LQ92901 407 aaKnown RBP11.28□□□□□ -0.6
LIN54-201ENST00000340417 SRXN1Q9BYN0 137 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 CENPVL1A0A0U1RR11 272 aa11.27□□□□□ -0.6
LIN54-201ENST00000340417 CDIPTO14735 213 aa11.27□□□□□ -0.6
LIN54-201ENST00000340417 OR8U9P0C7N5 309 aa11.27□□□□□ -0.6
LIN54-201ENST00000340417 ANXA7P20073 488 aaKnown RBP11.27□□□□□ -0.6
LIN54-201ENST00000340417 PDCD1Q15116 288 aa11.27□□□□□ -0.6
LIN54-201ENST00000340417 IGFBP7Q16270 282 aa11.27□□□□□ -0.6
LIN54-201ENST00000340417 SOWAHCQ53LP3 525 aaPredicted RBP11.27□□□□□ -0.6
LIN54-201ENST00000340417 APOOLQ6UXV4 268 aa11.27□□□□□ -0.6
LIN54-201ENST00000340417 ZNF431Q8TF32 576 aaPredicted RBP11.27□□□□□ -0.6
LIN54-201ENST00000340417 SLC25A31Q9H0C2 315 aa11.27□□□□□ -0.6
LIN54-201ENST00000340417 ISG20L2Q9H9L3 353 aaKnown RBP11.27□□□□□ -0.6
LIN54-201ENST00000340417 ACAA2P42765 397 aaKnown RBP11.27□□□□□ -0.6
LIN54-201ENST00000340417 MRPS34P82930 218 aaKnown RBP11.27□□□□□ -0.6
LIN54-201ENST00000340417 TRAT1Q6PIZ9 186 aa11.27□□□□□ -0.6
LIN54-201ENST00000340417 IDO2Q6ZQW0 420 aa11.27□□□□□ -0.6
LIN54-201ENST00000340417 SHISA5Q8N114 240 aa11.27□□□□□ -0.6
LIN54-201ENST00000340417 BEST4Q8NFU0 473 aa11.27□□□□□ -0.6
LIN54-201ENST00000340417 RFESDQ8TAC1 157 aa11.27□□□□□ -0.6
LIN54-201ENST00000340417 A0A0G2JMP0 313 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 CDC42EP2O14613 210 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 CYTIPO60759 359 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 PNPP00491 289 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 OR8U8P0C7N1 319 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 SHEQ5VZ18 495 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 STUMQ69YW2 141 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 VWA1Q6PCB0 445 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 OR4M2Q8NGB6 313 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 ZPLD1Q8TCW7 415 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 DLL4Q9NR61 685 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 YAE1D1Q9NRH1 226 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 IGLV3-12A0A075B6K2 115 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 GPR37O15354 613 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 HLA-AP01891 365 aaKnown RBP11.27□□□□□ -0.61
LIN54-201ENST00000340417 FUT3P21217 361 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 RANBP3Q9H6Z4 567 aaPredicted RBP11.27□□□□□ -0.61
LIN54-201ENST00000340417 CCDC59Q9P031 241 aaKnown RBP11.27□□□□□ -0.61
LIN54-201ENST00000340417 CHST2Q9Y4C5 530 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 IGHV3OR15-7A0A075B7D8 119 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 A0A1W2PNV4 684 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 CATSPERDQ86XM0 798 aa11.27□□□□□ -0.61
LIN54-201ENST00000340417 WDR38Q5JTN6 314 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 GLRX5Q86SX6 157 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 DCUN1D4Q92564 292 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 KCNK17Q96T54 332 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 KLK4Q9Y5K2 254 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 A0A0G2JMM0 328 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 A0A1W2PPB8 328 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 A0A1W2PPV4 95 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 A0A1W2PRS3 328 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 KIR3DP1A8MWS1 328 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 M0QYG6 137 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 SC5DO75845 299 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 CD80P33681 288 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 ERHP84090 104 aaKnown RBP11.26□□□□□ -0.61
LIN54-201ENST00000340417 TLE4Q04727 773 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 KISS1Q15726 138 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 ACSF3Q4G176 576 aaPredicted RBP11.26□□□□□ -0.61
LIN54-201ENST00000340417 C7orf50Q9BRJ6 194 aaKnown RBP11.26□□□□□ -0.61
LIN54-201ENST00000340417 ZNF385DQ9H6B1 395 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 FBXO7Q9Y3I1 522 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 GVINP1Q7Z2Y8 2422 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 LOC102723996A0A087X1L8 192 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 DEFB108AA8MXU0 73 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 B9A039 149 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 C4orf17Q53FE4 359 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms