RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 PLCXD1Q9NUJ7 323 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 KCNS2Q9ULS6 477 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 OR4C45A6NMZ5 311 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 CEACAM18A8MTB9 384 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 ZNF732B4DXR9 585 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 CDIPTO14735 213 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 FSTL3O95633 263 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 LHBP01229 141 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 ISG15P05161 165 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 MSMBP08118 114 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 PIPP12273 146 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-201ENST00000340074 MYL12AP19105 171 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 GBX2P52951 348 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-201ENST00000340074 GNG3P63215 75 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 ZNF404Q494X3 552 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 OR2G6Q5TZ20 316 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 TMEM244Q5VVB8 128 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 TMEM42Q69YG0 159 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 SFRP4Q6FHJ7 346 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-201ENST00000340074 GCSAMQ8N6F7 178 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 SCCPDHQ8NBX0 429 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 DEFB108BQ8NET1 73 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 OR5A2Q8NGI9 324 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 PATZ1Q9HBE1 687 aaKnown RBP12.78□□□□□ -0.36
UBE3B-201ENST00000340074 CNOT2Q9NZN8 540 aaKnown RBP12.78□□□□□ -0.36
UBE3B-201ENST00000340074 CLEC2DQ9UHP7 191 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 PSORS1C1Q9UIG5 152 aa12.78□□□□□ -0.36
UBE3B-201ENST00000340074 CAB39Q9Y376 341 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-201ENST00000340074 EXOSC1Q9Y3B2 195 aaKnown RBP12.78□□□□□ -0.36
UBE3B-201ENST00000340074 RRP15Q9Y3B9 282 aaKnown RBP12.78□□□□□ -0.36
UBE3B-201ENST00000340074 EFCAB10A6NFE3 127 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 OR5B21A6NL26 309 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 C3orf80F5H4A9 247 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 PLPP2O43688 288 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 ZNF12P17014 697 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 EGR1P18146 543 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 CD80P33681 288 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 GTF2A1P52655 376 aaPredicted RBP12.77□□□□□ -0.37
UBE3B-201ENST00000340074 SEC61A1P61619 476 aaKnown RBP12.77□□□□□ -0.37
UBE3B-201ENST00000340074 MRPL28Q13084 256 aaKnown RBP12.77□□□□□ -0.37
UBE3B-201ENST00000340074 TMPRSS11AQ6ZMR5 421 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 AHSA2Q719I0 299 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 ZNF676Q8N7Q3 588 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 CCDC54Q8NEL0 328 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 OR10AC1Q8NH08 325 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 OR51F2Q8NH61 342 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 LRRC29Q8WV35 223 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 OR51I2Q9H344 312 aa12.77□□□□□ -0.37
UBE3B-201ENST00000340074 C2CD3Q4AC94 2353 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 ANKRD61A6NGH8 418 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 OOEPA6NGQ2 149 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 F5H0A9 414 aaPredicted RBP12.76□□□□□ -0.37
UBE3B-201ENST00000340074 WNT2P09544 360 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 MYF6P23409 242 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 HSPA13P48723 471 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 TGM4P49221 684 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 DVL1P1P54792 670 aaPredicted RBP12.76□□□□□ -0.37
UBE3B-201ENST00000340074 MED21Q13503 144 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 C6orf141Q5SZD1 244 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 XAF1Q6GPH4 301 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 GLCCI1Q86VQ1 547 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 OR51A4Q8NGJ6 313 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 TMEM186Q96B77 213 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 ADAT3Q96EY9 351 aaPredicted RBP12.76□□□□□ -0.37
UBE3B-201ENST00000340074 PDCD1LG2Q9BQ51 273 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 ANKRD60Q9BZ19 345 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 HIF1ANQ9NWT6 349 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 CHCHD3Q9NX63 227 aaKnown RBP12.76□□□□□ -0.37
UBE3B-201ENST00000340074 ERVK-18Q9QC07 812 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 HHLA2Q9UM44 414 aa12.76□□□□□ -0.37
UBE3B-201ENST00000340074 CUBNO60494 3623 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 IGHV3OR15-7A0A075B7D8 119 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 TRAV38-1A0A0B4J264 116 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 TRBV2A0A0J9YWF9 115 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 LGALS8O00214 317 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 ZFPL1O95159 310 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 CCDC159P0C7I6 412 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 RPS2P15880 293 aaKnown RBP12.75□□□□□ -0.37
UBE3B-201ENST00000340074 HOXB4P17483 251 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-201ENST00000340074 C21orf33P30042 268 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-201ENST00000340074 CFHR2P36980 270 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 VHLP40337 213 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 LCN2P80188 198 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 UBE2V2Q15819 145 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 LYPD2Q6UXB3 125 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 DCDC5Q6ZRR9 648 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 STX19Q8N4C7 294 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 OR5AK2Q8NH90 309 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 HAVCR2Q8TDQ0 301 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 GATAD2BQ8WXI9 593 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 FGGYQ96C11 551 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 C10orf35Q96D05 121 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 CHST5Q9GZS9 411 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 FKBP14Q9NWM8 211 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 TMEM160Q9NX00 188 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 MIOXQ9UGB7 285 aa12.75□□□□□ -0.37
UBE3B-201ENST00000340074 TRAV20A0A0B4J274 112 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 PQLC2LA1A4F0 135 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 TMEM212A6NML5 194 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 SRRM5B3KS81 715 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms