RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SERTM1A2A2V5 107 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 DCDC2BA2VCK2 349 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 VSTM2BA6NLU5 285 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 ETV2O00321 342 aaPredicted RBP8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 FGF17O60258 216 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 GDF9O60383 454 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 CTSSP25774 331 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 CCKBRP32239 447 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 VASPP50552 380 aaPredicted RBP8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 CLDN6P56747 220 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 IAH1Q2TAA2 248 aaPredicted RBP8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 Q6ZN92 141 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 PLPPR4Q7Z2D5 763 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 ZNF676Q8N7Q3 588 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 ZNF738Q8NE65 137 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 RNF128Q8TEB7 428 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 OR5P2Q8WZ92 322 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 NMNAT3Q96T66 252 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 PTPN18Q99952 460 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 C20orf144Q9BQM9 153 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 NICN1Q9BSH3 213 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 C5orf66Q9H5L9 145 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 IKZF2Q9UKS7 526 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 ZFP37Q9Y6Q3 630 aaPredicted RBP8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 SZT2Q5T011 3432 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 GRIFINA4D1Z8 144 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 ARL5CA6NH57 179 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 TAAR5O14804 337 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 RAB29O14966 203 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 CSTAP01040 98 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 IMPA1P29218 277 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 ARRB1P49407 418 aaPredicted RBP8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 SUPT4H1P63272 117 aaKnown RBP8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 MRPL58Q14197 206 aaKnown RBP8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 FZD2Q14332 565 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 SLCO4C1Q6ZQN7 724 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 SUN3Q8TAQ9 357 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 CCDC74AQ96AQ1 378 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 LPAR4Q99677 370 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 TXN2Q99757 166 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 RBKSQ9H477 322 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 LAMTOR2Q9Y2Q5 125 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 RNF114Q9Y508 228 aa8.55□□□□□ -1.04
PTCHD4-201ENST00000339488 COCHO43405 550 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 GPRIN2O60269 458 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 OR6A2O95222 327 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 DDAH2O95865 285 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 TOMM40O96008 361 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 LYL1P12980 280 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 CCKARP32238 428 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 COMPP49747 757 aaPredicted RBP8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 PRRX1P54821 245 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 GTF3C1Q12789 2109 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 TMEM183BQ1AE95 376 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 SPSB3Q6PJ21 355 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 OPN5Q6U736 354 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 LIPHQ8WWY8 451 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 TIFAQ96CG3 184 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 KCNK6Q9Y257 313 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 IGLV3-10A0A075B6K4 115 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 NPIPA2E9PIF3 369 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 SLC33A1O00400 549 aaPredicted RBP8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 TBX19O60806 448 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 KNG1P01042 644 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 OR2T7P0C7T2 308 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 GLI4P10075 376 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 HSD11B1P28845 292 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 FLT3LGP49771 235 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 TBPL1P62380 186 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 DUSP2Q05923 314 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 ZFP36L1Q07352 338 aaKnown RBP8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 TMEM95Q3KNT9 176 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 GLYATL3Q5SZD4 288 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 C7orf61Q8IZ16 206 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 SYS1Q8N2H4 156 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 AQP3Q92482 292 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 C2orf50Q96LR7 162 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 PRRX2Q99811 253 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 KLHDC3Q9BQ90 382 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 PRSS27Q9BQR3 290 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 ALG12Q9BV10 488 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 GLIPR2Q9H4G4 154 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 SRD5A3Q9H8P0 318 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 GREB1Q4ZG55 1949 aa8.54□□□□□ -1.04
PTCHD4-201ENST00000339488 E5RGE8 158 aa8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 G3V3Y1 287 aa8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 PLPP1O14494 284 aa8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 GPR137BO60478 399 aa8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 LGALS2P05162 132 aa8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 GNB3P16520 340 aa8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 GCH1P30793 250 aa8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 NCBP2P52298 156 aaKnown RBP eCLIP8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 RAB38P57729 211 aa8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 RPL23AP62750 156 aaKnown RBP8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 HYAL1Q12794 435 aa8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 ADIRFQ15847 76 aa8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 LRRC69Q6ZNQ3 347 aa8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 SLC16A9Q7RTY1 509 aa8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 C16orf82Q7Z2V1 217 aa8.53□□□□□ -1.04
PTCHD4-201ENST00000339488 TTC9BQ8N6N2 239 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms