RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 VWA1Q6PCB0 445 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 IGF2-ASQ6U949 168 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 Q6ZSR3 168 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 NOXA1Q86UR1 476 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 CALHM1Q8IU99 346 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 RPRMLQ8N4K4 120 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 OR51T1Q8NGJ9 327 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 SNAPC3Q92966 411 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 MRGPRFQ96AM1 343 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 HS3ST6Q96QI5 342 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 C7orf50Q9BRJ6 194 aaKnown RBP6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 TMEM59Q9BXS4 323 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 FGF23Q9GZV9 251 aaPredicted RBP6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 CA10Q9NS85 328 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 TPRP12270 2363 aaKnown RBP6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 ZNF850A8MQ14 1090 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 SSNA1O43805 119 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 MTRF1O75570 445 aaKnown RBP6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 RAB3DO95716 219 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 NRASP01111 189 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 AMY2AP04746 511 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 AKAIN1P0CW23 69 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 TMEM225BP0DP42 221 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 MGMTP16455 207 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 IL32P24001 234 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 THBS4P35443 961 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 WNT5AP41221 380 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 PCBD1P61457 104 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 C6orf201Q7Z4U5 140 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 CNEP1R1Q8N9A8 125 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 C9orf106Q8NAJ2 232 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 UXS1Q8NBZ7 420 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 PTX4Q96A99 478 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 RAB3CQ96E17 227 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 HDHD3Q9BSH5 251 aaPredicted RBP6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 C1QTNF5Q9BXJ0 243 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 COPZ2Q9P299 210 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 GPR160Q9UJ42 338 aa6.4□□□□□ -1.38
SRFBP1-201ENST00000339397 SHANK1Q9Y566 2161 aa6.4□□□□□ -1.39
SRFBP1-201ENST00000339397 TRAV17A0A0B4J275 112 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 IGHV3-64DA0A0J9YX35 117 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 ZNF736B4DX44 427 aaPredicted RBP6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 ZNF205O95201 554 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 SIX6O95475 246 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 CYB5AP00167 134 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 IGHG3P01860 377 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 PMP2P02689 132 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 SFTPBP07988 381 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 CSF1P09603 554 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 TRAPPC2P0DI81 140 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 TRAPPC2BP0DI82 140 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 GABRR1P24046 479 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 BLVRBP30043 206 aaPredicted RBP6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 HRH1P35367 487 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 EIF2S3P41091 472 aaKnown RBP6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 MRPS15P82914 257 aaKnown RBP6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 FOXC1Q12948 553 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 TAF9Q16594 264 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 FBXW9Q5XUX1 488 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 SIGIRRQ6IA17 410 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 LAMTOR1Q6IAA8 161 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 IDO2Q6ZQW0 420 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 MDP1Q86V88 176 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 OR56B2PQ8NGI1 322 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 KCNG3Q8TAE7 436 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 PP6455Q8WZ26 134 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 DYRK2Q92630 601 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 CHIAQ9BZP6 476 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 CLCF1Q9UBD9 225 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 RABL2AQ9UBK7 228 aaPredicted RBP6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 ZNF69Q9UC07 566 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 RABL2BQ9UNT1 228 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 ESPL1Q14674 2120 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 IGKV1D-8A0A087WSZ0 117 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 OR14I1A6ND48 311 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 ZNF891A8MT65 544 aaPredicted RBP6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 F8VVB4 439 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 F8VWA3 439 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 MSTNO14793 375 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 CEACAM4O75871 244 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 APOC1P02654 83 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 TPOP07202 933 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 IGHV1-2P23083 117 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 NPBWR2P48146 333 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 ERVS71-1P61550 626 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 PIGYQ3MUY2 71 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 ZNF585AQ6P3V2 769 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 COLCA1Q6ZS62 124 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 MOB3CQ70IA8 216 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 SLC36A1Q7Z2H8 476 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 P4HA3Q7Z4N8 544 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 FGD2Q7Z6J4 655 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 TMED4Q7Z7H5 227 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 SLC7A5P1Q8MH63 180 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 BPIFB2Q8N4F0 458 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 OR13C8Q8NGS7 320 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 GRPEL2Q8TAA5 225 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 C15orf40Q8WUR7 153 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 FBXW5Q969U6 566 aa6.39□□□□□ -1.39
SRFBP1-201ENST00000339397 CCDC120Q96HB5 630 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms