RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 KIR3DP1A8MWS1 328 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 H3BMH7 237 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 LRATO95237 230 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 IGLC2P0DOY2 106 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 IGLC3P0DOY3 106 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 PGCP20142 388 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 GDF5P43026 501 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 GALR1P47211 349 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 CLDN15P56746 228 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 C5orf47Q569G3 176 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM220Q6QAJ8 160 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 BAGE3Q86Y29 109 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 BAGE2Q86Y30 109 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 ZSCAN4Q8NAM6 433 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 SLC25A40Q8TBP6 338 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 GNRHR2Q96P88 292 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 DCBLD2Q96PD2 775 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 IL17FQ96PD4 163 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 GEMIN7Q9H840 131 aaKnown RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 BCL2L10Q9HD36 194 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TRBV2A0A0J9YWF9 115 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 GAGE12BA1L429 117 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 SOCS6O14544 535 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 STK17BO94768 372 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 DBIP07108 87 aaKnown RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 CEACAM1P13688 526 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 DRD1P21728 446 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 ADORA2BP29275 332 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TIA1P31483 386 aaKnown RBP eCLIP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TIMP3P35625 211 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 P2RY2P41231 377 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 PPP1R1AQ13522 171 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 DOC2BQ14184 412 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 FAAP20Q6NZ36 180 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 Q7L0L9 218 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF627Q7L945 461 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 S100A7AQ86SG5 101 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 CLEC10AQ8IUN9 316 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 HMGB4Q8WW32 186 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 FGF11Q92914 225 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 ZMYND19Q96E35 227 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 AGMATQ9BSE5 352 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 SDF2L1Q9HCN8 221 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TRBV7-9A0A0J9YWB2 115 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 C1orf226A1L170 272 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 LOC730098B7Z3J9 87 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 HSD17B6O14756 317 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 B4GALT3O60512 393 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 RAMP2O60895 175 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 SRD5A2P31213 254 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 GPR6P46095 362 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 METAP1P53582 386 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 SLC16A1P53985 500 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 GAGE5Q13069 117 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 GAGE6Q13070 117 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 LHFPL2Q6ZUX7 228 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TSEN54Q7Z6J9 526 aaKnown RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 C1orf174Q8IYL3 243 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM217Q8N7C4 229 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 FER1L6-AS1Q8NA97 138 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 KHSRPQ92945 711 aaKnown RBP eCLIP3.7□□□□□ -1.826e-7■■■■■ 30.7
NEDD4-201ENST00000338963 FGGYQ96C11 551 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 MYADMQ96S97 322 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 NMNAT2Q9BZQ4 307 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 WRAP73Q9P2S5 460 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 IL36AQ9UHA7 158 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 AK3Q9UIJ7 227 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM14AQ9Y6G1 99 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 IGLC7A0M8Q6 106 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 LAMTOR5O43504 91 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF43P17038 809 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 IL11P20809 199 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TNFSF9P41273 254 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 CDKN2AP42771 156 aaKnown RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 PDX1P52945 283 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 LILRA4P59901 499 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TCEA2Q15560 299 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 PKDCCQ504Y2 493 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 FAM78BQ5VT40 261 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TRNP1Q6NT89 227 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 SYT13Q7L8C5 426 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 ADGRE4PQ86SQ3 457 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 PAQR4Q8N4S7 273 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 AQP3Q92482 292 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 EMG1Q92979 244 aaKnown RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF764Q96H86 408 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 WDYHV1Q96HA8 205 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 CAPNS2Q96L46 248 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 PARLQ9H300 379 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TJP1Q07157 1748 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 HIDE1A8MVS5 230 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 PNMTP11086 282 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 GZMHP20718 246 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 GJA4P35212 333 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 BCL6P41182 706 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 LSSP48449 732 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 RIPPLY3P57055 190 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 TAS2R46P59540 309 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 RHOBP62745 196 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 C17orf67Q0P5P2 114 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms